fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G06800.1 VQIKEALQLQLDVQRH at 280/375 in AT5G06800.1
VQIKEALQLQLDVQRH at 280/302 in AT5G06800.2
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt006638 FQIREALQLQLDVQRR in 325/411 AT5G06800.1 1st_1st 0.323481116 Ib
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G06800.1     MMD--NINFE-------------FSNASQ-----------GSRLQ-------LQQQPPQP
pt006638_POPTR_ -MNTRNIDCEEGVQQNHGVMIGDFVNLSSQYFGNQQIRNMAPRLQPAVMEAGCQQQNISP
                 *:  **: *             * * *.           ..***        ***  .*

AT5G06800.1     FNLQDLNMIQYNQPSSP-WTTETFSGLTPYDCTANQSFPVQCSS-SKPYPSSFHPYHHQS
pt006638_POPTR_ ERSSSSILSRFESPASSFYATERCMRFPQYDCQVGSSF---CSQYSKSYDS------HQS
                 . ..  : :::.*:*. ::**    :. *** ...**   **. **.* *      ***

AT5G06800.1     SDSPSL-----DQSVSMIPMQPLPDQYMKPLYQRSCSNDFAATNASSAS-----------
pt006638_POPTR_ SD-PNYSINLGEQADHNFGLNSTLESVVKPHYSYYNSFDKSDKGLSSSSGNKLPSQQHNK
                ** *.      :*:   : ::.  :. :** *.   * * : .. **:*           

AT5G06800.1     -------------YSLSFEASHDPQELCRRTYSNSNVTHLNFTSSQHQPKQSHPRFSSPP
pt006638_POPTR_ FLDIHGTVSLGNNFSVPFQGNQDRQVGC-NPYS-SPFAGQSFNSLEG--KQS-------P
                             :*:.*:..:* *  * ..** * .:  .*.* :   ***       *

AT5G06800.1     SFSIHGG--SMAPNCVNKTRIRWTQDLHEKFVECVNRLGGADKATPKAILKRMDSDGLTI
pt006638_POPTR_ RFSLGGGPTSSGKDLSSKTRIRWTQDLHEKFVECVNRLGGAEKATPKAILNLMDSDGLTI
                 **: **  * . :  .************************:********: ********

AT5G06800.1     FHVKSHLQKYRIAKYMPESQEGKFEKRACAKELSQLDTRTGVQIKEALQLQLDVQRHLHE
pt006638_POPTR_ FHVKSHLQKYRIAKYMPEPSEGKAEKRNSINDVSQLDIKTGFQIREALQLQLDVQRRLHE
                ******************..*** *** . :::**** :**.**:***********:***

AT5G06800.1     QLEIQRNLQLRIEEQGKQLKMMMEQQQKNKESLLKKLPDAEASLSLLDPHIHSPPSP-FL
pt006638_POPTR_ QLEIQRNLQLRIEEQGKQLKMMFDQQQKTTNSLLNK--------QNLD--ITSPDEPAFS
                **********************::****..:***:*        . **  * ** .* * 

AT5G06800.1     VHDAEALMLT-SYEDTQLQSTKS
pt006638_POPTR_ LEDIDVSILEGSDNNTQFPSKIS
                :.* :. :*  * ::**: *. *
BoxShade v3.31 C (beta, 970507) Output
AT5G06800.1     M M D - - N I N F E - - - - - - - - - - - - - F S N A S Q - - - - - - - - - - - G S R L Q - - - - - - - L Q Q Q P P Q P
pt006638_POPTR_    - M N T R N I D C E E G V Q Q N H G V M I G D F V N L S S Q Y F G N Q Q I R N M A P R L Q P A V M E A G C Q Q Q N I S P
 
AT5G06800.1     F N L Q D L N M I Q Y N Q P S S P - W T T E T F S G L T P Y D C T A N Q S F P V Q C S S - S K P Y P S S F H P Y H H Q S
pt006638_POPTR_    E R S S S S I L S R F E S P A S S F Y A T E R C M R F P Q Y D C Q V G S S F - - - C S Q Y S K S Y D S - - - - - - H Q S
 
AT5G06800.1     S D S P S L - - - - - D Q S V S M I P M Q P L P D Q Y M K P L Y Q R S C S N D F A A T N A S S A S - - - - - - - - - - -
pt006638_POPTR_    S D - P N Y S I N L G E Q A D H N F G L N S T L E S V V K P H Y S Y Y N S F D K S D K G L S S S S G N K L P S Q Q H N K
 
AT5G06800.1     - - - - - - - - - - - - - Y S L S F E A S H D P Q E L C R R T Y S N S N V T H L N F T S S Q H Q P K Q S H P R F S S P P
pt006638_POPTR_    F L D I H G T V S L G N N F S V P F Q G N Q D R Q V G C - N P Y S - S P F A G Q S F N S L E G - - K Q S - - - - - - - P
 
AT5G06800.1     S F S I H G G - - S M A P N C V N K T R I R W T Q D L H E K F V E C V N R L G G A D K A T P K A I L K R M D S D G L T I
pt006638_POPTR_    R F S L G G G P T S S G K D L S S K T R I R W T Q D L H E K F V E C V N R L G G A E K A T P K A I L N L M D S D G L T I
 
AT5G06800.1     F H V K S H L Q K Y R I A K Y M P E S Q E G K F E K R A C A K E L S Q L D T R T G V Q I K E A L Q L Q L D V Q R H L H E
pt006638_POPTR_    F H V K S H L Q K Y R I A K Y M P E P S E G K A E K R N S I N D V S Q L D I K T G F Q I R E A L Q L Q L D V Q R R L H E
 
AT5G06800.1     Q L E I Q R N L Q L R I E E Q G K Q L K M M M E Q Q Q K N K E S L L K K L P D A E A S L S L L D P H I H S P P S P - F L
pt006638_POPTR_    Q L E I Q R N L Q L R I E E Q G K Q L K M M F D Q Q Q K T T N S L L N K - - - - - - - - Q N L D - - I T S P D E P A F S
 
AT5G06800.1     V H D A E A L M L T - S Y E D T Q L Q S T K S
pt006638_POPTR_    L E D I D V S I L E G S D N N T Q F P S K I S
 
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