fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G06800.1 VQIKEALQLQLDVQRH at 280/375 in AT5G06800.1
VQIKEALQLQLDVQRH at 280/302 in AT5G06800.2
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os019397 not found in 424aa AT5G06800.1 1st_1st 0.305418719 Ib

Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G06800.1     ----MMDNINFEFSNASQGSRLQLQQQPPQPFNLQDLNMIQYNQPSSPWTTETFSGLTPY
Os019397_Os04t0 MLQDIMNTKKIKLHDCHFGSPL----CDPSP-----------------------------
                    :*:. :::: :.  ** *      *.*                             

AT5G06800.1     DCTANQSFPVQCSSSKPYPSSFHP------YHHQSSDSPSLDQSVSMIPMQPLPDQYMKP
Os019397_Os04t0 -------APHLLSSAAAAGLSFHPGLVSSAAQHQQHGAGGW-----------LHEEYYAP
                        *   **: .   ****       :**. .: .            * ::*  *

AT5G06800.1     -------LYQRSC--SND---FAATN-----------ASSASYSLSFEASHDPQELCR--
Os019397_Os04t0 RSSPPSSLLAQTCVGSNATAFYAAENLPQFDFPALGTAAAAAAKAPFRSSE--SELYRPV
                       *  ::*  **    :** *           *::*: . .*.:*.  .** *  

AT5G06800.1     -----------RTY-------SNSNVTHLNFTSSQHQPKQSHPRFSSPPSFSIHGG----
Os019397_Os04t0 DPLLLRADHSVRTYYVRPQKRDSGERTPLPPPSQQQHQDRIHGLFAGAPTTRLLSGEPKI
                           ***       ...: * *  .*.*:: .: *  *:..*:  : .*    

AT5G06800.1     -SMAP--------------------------NCV------------------NKTRIRWT
Os019397_Os04t0 HSFPPQVAAKPILPAMDAPSLQNQMENQLTRNCIGAATPVTPTGNLAGSGAPSKTRIRWT
                 *:.*                          **:                  .*******

AT5G06800.1     QDLHEKFVECVNRLGGADKATPKAILKRMDSDGLTIFHVKSHLQKYRIAKYMPESQEGK-
Os019397_Os04t0 QDLHERFVDCVNQLGGADKATPKGILKLMNSDGLTIYHIKSHLQKYRIAKYMPASSEGKQ
                *****:**:***:**********.*** *:******:*:************** *.*** 

AT5G06800.1     FEKRACAKELSQLDTRTGVQIKEALQLQLDVQRHLHEQLEIQRNLQLRIEEQGKQLKMMM
Os019397_Os04t0 LEKRATGNDMQNLDPKTGMQITEALRVQLDVQRRLHEQLEIQRNLQLRIEEQGKRLQKMF
                :**** .:::.:**.:**:**.***::******:********************:*: *:

AT5G06800.1     EQQQKNKESLLKKLPDAEASLSLLDPHIHSPPSPFLVHDAE------------ALMLTSY
Os019397_Os04t0 EDQLK-------------ASRSVMEPQELDDVVAFAAGDGDDDAFDDVDVQLLAVAGSGY
                *:* *             ** *:::*:  .   .* . *.:            *:  :.*

AT5G06800.1     EDTQLQSTKS
Os019397_Os04t0 DDAGFQSKIS
                :*: :**. *


BoxShade v3.31 C (beta, 970507) Output
AT5G06800.1     - - - - M M D N I N F E F S N A S Q G S R L Q L Q Q Q P P Q P F N L Q D L N M I Q Y N Q P S S P W T T E T F S G L T P Y
Os019397_Os04t0    M L Q D I M N T K K I K L H D C H F G S P L - - - - C D P S P - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT5G06800.1     D C T A N Q S F P V Q C S S S K P Y P S S F H P - - - - - - Y H H Q S S D S P S L D Q S V S M I P M Q P L P D Q Y M K P
Os019397_Os04t0    - - - - - - - A P H L L S S A A A A G L S F H P G L V S S A A Q H Q Q H G A G G W - - - - - - - - - - - L H E E Y Y A P
 
AT5G06800.1     - - - - - - - L Y Q R S C - - S N D - - - F A A T N - - - - - - - - - - - A S S A S Y S L S F E A S H D P Q E L C R - -
Os019397_Os04t0    R S S P P S S L L A Q T C V G S N A T A F Y A A E N L P Q F D F P A L G T A A A A A A K A P F R S S E - - S E L Y R P V
 
AT5G06800.1     - - - - - - - - - - - R T Y - - - - - - - S N S N V T H L N F T S S Q H Q P K Q S H P R F S S P P S F S I H G G - - - -
Os019397_Os04t0    D P L L L R A D H S V R T Y Y V R P Q K R D S G E R T P L P P P S Q Q Q H Q D R I H G L F A G A P T T R L L S G E P K I
 
AT5G06800.1     - S M A P - - - - - - - - - - - - - - - - - - - - - - - - - - N C V - - - - - - - - - - - - - - - - - - N K T R I R W T
Os019397_Os04t0    H S F P P Q V A A K P I L P A M D A P S L Q N Q M E N Q L T R N C I G A A T P V T P T G N L A G S G A P S K T R I R W T
 
AT5G06800.1     Q D L H E K F V E C V N R L G G A D K A T P K A I L K R M D S D G L T I F H V K S H L Q K Y R I A K Y M P E S Q E G K -
Os019397_Os04t0    Q D L H E R F V D C V N Q L G G A D K A T P K G I L K L M N S D G L T I Y H I K S H L Q K Y R I A K Y M P A S S E G K Q
 
AT5G06800.1     F E K R A C A K E L S Q L D T R T G V Q I K E A L Q L Q L D V Q R H L H E Q L E I Q R N L Q L R I E E Q G K Q L K M M M
Os019397_Os04t0    L E K R A T G N D M Q N L D P K T G M Q I T E A L R V Q L D V Q R R L H E Q L E I Q R N L Q L R I E E Q G K R L Q K M F
 
AT5G06800.1     E Q Q Q K N K E S L L K K L P D A E A S L S L L D P H I H S P P S P F L V H D A E - - - - - - - - - - - - A L M L T S Y
Os019397_Os04t0    E D Q L K - - - - - - - - - - - - - A S R S V M E P Q E L D D V V A F A A G D G D D D A F D D V D V Q L L A V A G S G Y
 
AT5G06800.1     E D T Q L Q S T K S
Os019397_Os04t0    D D A G F Q S K I S
 
0