fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G06800.1 VQIKEALQLQLDVQRH at 280/375 in AT5G06800.1
VQIKEALQLQLDVQRH at 280/302 in AT5G06800.2
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm052117 LQIREALKLQLDAQRR in 340/401 AT5G06800.1 1st_1st 0.302134646 Ib
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Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G06800.1     MMDN-----------------INFEFSNASQGSRLQLQQQPPQPFNLQDLNMI-------
gm052117_Glyma1 MNENKIDWGGLIQQSHGLSGDFNSEF-----GNRYCQYFDIRQAWNMGPLSMFGGEATDH
                * :*                 :* **     *.*     :  *.:*:  *.*:       

AT5G06800.1     ----------------QYNQPSSP-WTTETFSGLTPYDCTANQSFPVQCSSSKPYPSSFH
gm052117_Glyma1 ELPNIGHVKSSGTIMSRFESPASAFYATENCMGFAEYDC---------------------
                                :::.*:*. ::**.  *:: ***                     

AT5G06800.1     PYHHQSSDSPSLDQSVSMIPMQPLPDQYMK------PLYQR-SCSNDFA-ATNASSASYS
gm052117_Glyma1 -----------------QVGVHSLSSQLCKINDLEFPLYQSFSRENLFLDSANQSETNFD
                                  : ::.*..*  *      ****  * .* *  ::* *.:.:.

AT5G06800.1     LS------FEASHDPQELCRRTYSNSN-VTHLNFTSSQHQP-------------------
gm052117_Glyma1 LSNTLQSIVKSQLNSGNQCRRSPEKSNQISSGNFPSSKFLPIEQQKLFVDGLIRGSSFLK
                **      .::. :. : ***: .:** ::  **.**:. *                   

AT5G06800.1     --KQSH-----------P--RFSSP-----PSFSIHG----GSMAPN---CVNKTRIRWT
gm052117_Glyma1 KGNQDHMVGHGSFNLSVPQLRFSSQIEKLYPTLSAGSVSTIGNSASNGAIVSSKTRIRWT
                  :*.*           *  ****      *::*  .    *. *.*     .*******

AT5G06800.1     QDLHEKFVECVNRLGGADKATPKAILKRMDSDGLTIFHVKSHLQKYRIAKYMPESQEGKF
gm052117_Glyma1 KDLHEKFVECVNRLGGAEQATPKAILKMMNTDGLTIFHVKSHLQKYRIAKFIPEPSHGKS
                :****************::******** *::*******************::**...** 

AT5G06800.1     EKRACAKELSQLDTRTGVQIKEALQLQLDVQRHLHEQLEIQRNLQLRIEEQGKQLKMMME
gm052117_Glyma1 DKRTHTKDVHHLDVKTGLQIREALKLQLDAQRRLHEQLEIQRKLQLRIEEQGRELKKMFD
                :**: :*:: :**.:**:**:***:****.**:*********:*********::** *::

AT5G06800.1     QQQKNKESLLKKLPDAEASLSLLDPHIHSPPSPFLVHDAEALMLTSYEDTQLQSTKS
gm052117_Glyma1 QQQKTNNN----LPNTQNSAT--------------------------DETTINH---
                ****.::.    **::: * :                          ::* ::
BoxShade v3.31 C (beta, 970507) Output
AT5G06800.1     M M D N - - - - - - - - - - - - - - - - - I N F E F S N A S Q G S R L Q L Q Q Q P P Q P F N L Q D L N M I - - - - - - -
gm052117_Glyma1    M N E N K I D W G G L I Q Q S H G L S G D F N S E F - - - - - G N R Y C Q Y F D I R Q A W N M G P L S M F G G E A T D H
 
AT5G06800.1     - - - - - - - - - - - - - - - - Q Y N Q P S S P - W T T E T F S G L T P Y D C T A N Q S F P V Q C S S S K P Y P S S F H
gm052117_Glyma1    E L P N I G H V K S S G T I M S R F E S P A S A F Y A T E N C M G F A E Y D C - - - - - - - - - - - - - - - - - - - - -
 
AT5G06800.1     P Y H H Q S S D S P S L D Q S V S M I P M Q P L P D Q Y M K - - - - - - P L Y Q R - S C S N D F A - A T N A S S A S Y S
gm052117_Glyma1    - - - - - - - - - - - - - - - - - Q V G V H S L S S Q L C K I N D L E F P L Y Q S F S R E N L F L D S A N Q S E T N F D
 
AT5G06800.1     L S - - - - - - F E A S H D P Q E L C R R T Y S N S N - V T H L N F T S S Q H Q P - - - - - - - - - - - - - - - - - - -
gm052117_Glyma1    L S N T L Q S I V K S Q L N S G N Q C R R S P E K S N Q I S S G N F P S S K F L P I E Q Q K L F V D G L I R G S S F L K
 
AT5G06800.1     - - K Q S H - - - - - - - - - - - P - - R F S S P - - - - - P S F S I H G - - - - G S M A P N - - - C V N K T R I R W T
gm052117_Glyma1    K G N Q D H M V G H G S F N L S V P Q L R F S S Q I E K L Y P T L S A G S V S T I G N S A S N G A I V S S K T R I R W T
 
AT5G06800.1     Q D L H E K F V E C V N R L G G A D K A T P K A I L K R M D S D G L T I F H V K S H L Q K Y R I A K Y M P E S Q E G K F
gm052117_Glyma1    K D L H E K F V E C V N R L G G A E Q A T P K A I L K M M N T D G L T I F H V K S H L Q K Y R I A K F I P E P S H G K S
 
AT5G06800.1     E K R A C A K E L S Q L D T R T G V Q I K E A L Q L Q L D V Q R H L H E Q L E I Q R N L Q L R I E E Q G K Q L K M M M E
gm052117_Glyma1    D K R T H T K D V H H L D V K T G L Q I R E A L K L Q L D A Q R R L H E Q L E I Q R K L Q L R I E E Q G R E L K K M F D
 
AT5G06800.1     Q Q Q K N K E S L L K K L P D A E A S L S L L D P H I H S P P S P F L V H D A E A L M L T S Y E D T Q L Q S T K S
gm052117_Glyma1    Q Q Q K T N N N - - - - L P N T Q N S A T - - - - - - - - - - - - - - - - - - - - - - - - - - D E T T I N H - - -
 
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