fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G06950.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pp007082 not found in 343aa AT5G06950.4 1st_not 0.628626692 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (1 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G06950.1     MAD--TSPRTDVSTD-------DDTDHPDLGSEGALVNTAASDSSDRSKGKMDQKTLRRL
pp007082_Pp1s25 MGDNSASARTDSSSDMDGDAKLDDGQH--LASGGGNSNDSSLETGTKNG---DSKVLRRL
                *.*  :*.*** *:*       ** :*  *.* *.  * :: ::. :.    *.*.****

AT5G06950.1     AQNREAARKSRLRKKAYVQQLENSRLKLTQLEQELQRARQQGVFISGTG---DQAHSTGG
pp007082_Pp1s25 AQNREAARKSRLRKKAYVQQLESSRIKLNQLEQELQRTRQQQGLYLGPGSYSDQNGQSGG
                **********************.**:**.********:***  :  *.*   **  .:**

AT5G06950.1     --------NGALAFDAEHSRWLEEKNKQMNELRSALNAHAGDSELRIIVDGVMAHYEELF
pp007082_Pp1s25 VGGANAYSSGAAAFDLEYARWVEDHTRQMSELRVALQAHVADADLRLLVDGSMAHYDDLF
                        .** *** *::**:*::.:**.*** **:**..*::**::*** ****::**

AT5G06950.1     RIKSNAAKNDVFHLLSGMWKTPAERCFLWLGGFRSSELLKLLANQLEPMTERQLMGINNL
pp007082_Pp1s25 RLKDAAAKADVFHLVSGMWKTPAERCFVWIGGCRPSELLKILVPQIEPLTEQQLLNICNL
                *:*. *** *****:************:*:** *.*****:*. *:**:**:**:.* **

AT5G06950.1     QQTSQQAEDALSQGMESLQQSLADTLSSGTLGSSSSGNVASYMGQMAMAMGKLGTLEGFI
pp007082_Pp1s25 QQSSQQGEEALSQGMEQLQQSLAETLSAGSLGSAA--NVANYMGQMAVAMGQLGNLEGFV
                **:***.*:*******.******:***:*:***::  ***.******:***:**.****:

AT5G06950.1     RQADNLRLQTLQQMIRVLTTRQSARALLAIHDYFSRLRALSSLWLARPRE
pp007082_Pp1s25 RQADHLRQQTLQQMHRVLTIRQVARGLLAMGDYFARLRALSSLWSARPRE
                ****:** ****** **** ** **.***: ***:********* *****
BoxShade v3.31 C (beta, 970507) Output
AT5G06950.1     M A D - - T S P R T D V S T D - - - - - - - D D T D H P D L G S E G A L V N T A A S D S S D R S K G K M D Q K T L R R L
pp007082_Pp1s25    M G D N S A S A R T D S S S D M D G D A K L D D G Q H - - L A S G G G N S N D S S L E T G T K N G - - - D S K V L R R L
 
AT5G06950.1     A Q N R E A A R K S R L R K K A Y V Q Q L E N S R L K L T Q L E Q E L Q R A R Q Q G V F I S G T G - - - D Q A H S T G G
pp007082_Pp1s25    A Q N R E A A R K S R L R K K A Y V Q Q L E S S R I K L N Q L E Q E L Q R T R Q Q Q G L Y L G P G S Y S D Q N G Q S G G
 
AT5G06950.1     - - - - - - - - N G A L A F D A E H S R W L E E K N K Q M N E L R S A L N A H A G D S E L R I I V D G V M A H Y E E L F
pp007082_Pp1s25    V G G A N A Y S S G A A A F D L E Y A R W V E D H T R Q M S E L R V A L Q A H V A D A D L R L L V D G S M A H Y D D L F
 
AT5G06950.1     R I K S N A A K N D V F H L L S G M W K T P A E R C F L W L G G F R S S E L L K L L A N Q L E P M T E R Q L M G I N N L
pp007082_Pp1s25    R L K D A A A K A D V F H L V S G M W K T P A E R C F V W I G G C R P S E L L K I L V P Q I E P L T E Q Q L L N I C N L
 
AT5G06950.1     Q Q T S Q Q A E D A L S Q G M E S L Q Q S L A D T L S S G T L G S S S S G N V A S Y M G Q M A M A M G K L G T L E G F I
pp007082_Pp1s25    Q Q S S Q Q G E E A L S Q G M E Q L Q Q S L A E T L S A G S L G S A A - - N V A N Y M G Q M A V A M G Q L G N L E G F V
 
AT5G06950.1     R Q A D N L R L Q T L Q Q M I R V L T T R Q S A R A L L A I H D Y F S R L R A L S S L W L A R P R E
pp007082_Pp1s25    R Q A D H L R Q Q T L Q Q M H R V L T I R Q V A R G L L A M G D Y F A R L R A L S S L W S A R P R E
 
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