fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G06960.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pp007082 not found in 343aa AT5G06950.4 1st_not 0.594339622 II
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G06960.1     MGD--TSPRTSVSTDGDTDHNNLMFDEG-HLGIGASDSSDRS----KSKMDQKTLRRLAQ
pp007082_Pp1s25 MGDNSASARTDSSSDMDGDAK---LDDGQHLASGGGNSNDSSLETGTKNGDSKVLRRLAQ
                ***  :*.**. *:* * * :   :*:* **. *..:*.* *    ..: *.*.******

AT5G06960.1     NREAARKSRLRKKAYVQQLENSRLKLTQLEQELQRAR-QQGVFI--SSSGDQAHSTAG--
pp007082_Pp1s25 NREAARKSRLRKKAYVQQLESSRIKLNQLEQELQRTRQQQGLYLGPGSYSDQNGQSGGVG
                ********************.**:**.********:* ***:::  .* .**  .:.*  

AT5G06960.1     ------DGAMAFDVEYRRWQEDKNRQMKELSSAIDSHATDSELRIIVDGVIAHYEELYRI
pp007082_Pp1s25 GANAYSSGAAAFDLEYARWVEDHTRQMSELRVALQAHVADADLRLLVDGSMAHYDDLFRL
                      .** ***:** ** **:.***.**  *:::*.:*::**::*** :***::*:*:

AT5G06960.1     KGNAAKSDVFHLLSGMWKTPAERCFLWLGGFRSSELLKLIASQLEPLTEQQSLDINNLQQ
pp007082_Pp1s25 KDAAAKADVFHLVSGMWKTPAERCFVWIGGCRPSELLKILVPQIEPLTEQQLLNICNLQQ
                *. ***:*****:************:*:** *.*****::..*:******* *:* ****

AT5G06960.1     SSQQAEDALSQGMDNLQQSLADTLSSGTLGSSSSGNVASYMGQMAMAMGKLGTLEGFIRQ
pp007082_Pp1s25 SSQQGEEALSQGMEQLQQSLAETLSAGSLGSAA--NVANYMGQMAVAMGQLGNLEGFVRQ
                ****.*:******::******:***:*:***::  ***.******:***:**.****:**

AT5G06960.1     ADNLRLQTYQQMVRLLTTRQSARALLAVHNYTLRLRALSSLWLARPRE
pp007082_Pp1s25 ADHLRQQTLQQMHRVLTIRQVARGLLAMGDYFARLRALSSLWSARPRE
                **:** ** *** *:** ** **.***: :*  ********* *****
BoxShade v3.31 C (beta, 970507) Output
AT5G06960.1     M G D - - T S P R T S V S T D G D T D H N N L M F D E G - H L G I G A S D S S D R S - - - - K S K M D Q K T L R R L A Q
pp007082_Pp1s25    M G D N S A S A R T D S S S D M D G D A K - - - L D D G Q H L A S G G G N S N D S S L E T G T K N G D S K V L R R L A Q
 
AT5G06960.1     N R E A A R K S R L R K K A Y V Q Q L E N S R L K L T Q L E Q E L Q R A R - Q Q G V F I - - S S S G D Q A H S T A G - -
pp007082_Pp1s25    N R E A A R K S R L R K K A Y V Q Q L E S S R I K L N Q L E Q E L Q R T R Q Q Q G L Y L G P G S Y S D Q N G Q S G G V G
 
AT5G06960.1     - - - - - - D G A M A F D V E Y R R W Q E D K N R Q M K E L S S A I D S H A T D S E L R I I V D G V I A H Y E E L Y R I
pp007082_Pp1s25    G A N A Y S S G A A A F D L E Y A R W V E D H T R Q M S E L R V A L Q A H V A D A D L R L L V D G S M A H Y D D L F R L
 
AT5G06960.1     K G N A A K S D V F H L L S G M W K T P A E R C F L W L G G F R S S E L L K L I A S Q L E P L T E Q Q S L D I N N L Q Q
pp007082_Pp1s25    K D A A A K A D V F H L V S G M W K T P A E R C F V W I G G C R P S E L L K I L V P Q I E P L T E Q Q L L N I C N L Q Q
 
AT5G06960.1     S S Q Q A E D A L S Q G M D N L Q Q S L A D T L S S G T L G S S S S G N V A S Y M G Q M A M A M G K L G T L E G F I R Q
pp007082_Pp1s25    S S Q Q G E E A L S Q G M E Q L Q Q S L A E T L S A G S L G S A A - - N V A N Y M G Q M A V A M G Q L G N L E G F V R Q
 
AT5G06960.1     A D N L R L Q T Y Q Q M V R L L T T R Q S A R A L L A V H N Y T L R L R A L S S L W L A R P R E
pp007082_Pp1s25    A D H L R Q Q T L Q Q M H R V L T I R Q V A R G L L A M G D Y F A R L R A L S S L W S A R P R E
 
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