fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G06960.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt032072 not found in 465aa AT5G06950.4 1st_not 0.777358490 II
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G06960.1     ------------------------------------------------------------
pt032072_POPTR_ MPSFDPQLPISNAICVEGSTIHPHCATYFGVFLEDDAIDLSPGAVFNSAKERTQAIPSDP
                                                                            

AT5G06960.1     ------------------------------------------------------------
pt032072_POPTR_ LTSGALDKKQSSSVQVESQRLPLEKVQRLNRVSIPSVGTENWGETQKLLLENIQQSNQVS
                                                                            

AT5G06960.1     -------------MGDTSPRTSVSTDGDTDHNNLMFDEGHLGIG--ASDSSDRSKSKMDQ
pt032072_POPTR_ IPSVNTENWGETNMADASPRTDISTDADTDDKNQRFD-GSLSTALVASDSSDRSKDKMDQ
                             *.*:****.:***.***.:*  ** * *. .  *********.****

AT5G06960.1     KTLRRLAQNREAARKSRLRKKAYVQQLENSRLKLTQLEQELQRARQQGVFISSSGDQAHS
pt032072_POPTR_ KTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQELQRARQQGIFVSSSGDQSHS
                ****************************.*******************:*:******:**

AT5G06960.1     TAGDGAMAFDVEYRRWQEDKNRQMKELSSAIDSHATDSELRIIVDGVIAHYEELYRIKGN
pt032072_POPTR_ MSGNGAMAFDVEYARWLEDQNRQINELRSAVNSHTGDTELRIIIDGIMAHYDEVFRLKSN
                 :*:********* ** **:***::** **::**: *:*****:**::***:*::*:*.*

AT5G06960.1     AAKSDVFHLLSGMWKTPAERCFLWLGGFRSSELLKLIASQLEPLTEQQSLDINNLQQSSQ
pt032072_POPTR_ AAKADVFHLLSGMWKTPAERCFLWLGGFRSSELLKLLVNQLEPLTDQQLVGIGNLQQSSQ
                ***:********************************:..******:** :.*.*******

AT5G06960.1     QAEDALSQGMDNLQQSLADTLSSGTLGSS-SSGNVASYMGQMAMAMGKLGTLEGFIRQAD
pt032072_POPTR_ QAEDALSQGMEALQQSLAETLSSGSLGSSGSSGNVANYMGQMAMAMGKLGTLEGFIRQAD
                **********: ******:*****:**** ******.***********************

AT5G06960.1     NLRLQTYQQMVRLLTTRQSARALLAVHNYTLRLRALSSLWLARPRE
pt032072_POPTR_ NLRQQTLQQMQRILTTRQSARALLAIHDYFSRLRALSSLWLARPRE
                *** ** *** *:************:*:*  ***************
BoxShade v3.31 C (beta, 970507) Output
AT5G06960.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt032072_POPTR_    M P S F D P Q L P I S N A I C V E G S T I H P H C A T Y F G V F L E D D A I D L S P G A V F N S A K E R T Q A I P S D P
 
AT5G06960.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt032072_POPTR_    L T S G A L D K K Q S S S V Q V E S Q R L P L E K V Q R L N R V S I P S V G T E N W G E T Q K L L L E N I Q Q S N Q V S
 
AT5G06960.1     - - - - - - - - - - - - - M G D T S P R T S V S T D G D T D H N N L M F D E G H L G I G - - A S D S S D R S K S K M D Q
pt032072_POPTR_    I P S V N T E N W G E T N M A D A S P R T D I S T D A D T D D K N Q R F D - G S L S T A L V A S D S S D R S K D K M D Q
 
AT5G06960.1     K T L R R L A Q N R E A A R K S R L R K K A Y V Q Q L E N S R L K L T Q L E Q E L Q R A R Q Q G V F I S S S G D Q A H S
pt032072_POPTR_    K T L R R L A Q N R E A A R K S R L R K K A Y V Q Q L E S S R L K L T Q L E Q E L Q R A R Q Q G I F V S S S G D Q S H S
 
AT5G06960.1     T A G D G A M A F D V E Y R R W Q E D K N R Q M K E L S S A I D S H A T D S E L R I I V D G V I A H Y E E L Y R I K G N
pt032072_POPTR_    M S G N G A M A F D V E Y A R W L E D Q N R Q I N E L R S A V N S H T G D T E L R I I I D G I M A H Y D E V F R L K S N
 
AT5G06960.1     A A K S D V F H L L S G M W K T P A E R C F L W L G G F R S S E L L K L I A S Q L E P L T E Q Q S L D I N N L Q Q S S Q
pt032072_POPTR_    A A K A D V F H L L S G M W K T P A E R C F L W L G G F R S S E L L K L L V N Q L E P L T D Q Q L V G I G N L Q Q S S Q
 
AT5G06960.1     Q A E D A L S Q G M D N L Q Q S L A D T L S S G T L G S S - S S G N V A S Y M G Q M A M A M G K L G T L E G F I R Q A D
pt032072_POPTR_    Q A E D A L S Q G M E A L Q Q S L A E T L S S G S L G S S G S S G N V A N Y M G Q M A M A M G K L G T L E G F I R Q A D
 
AT5G06960.1     N L R L Q T Y Q Q M V R L L T T R Q S A R A L L A V H N Y T L R L R A L S S L W L A R P R E
pt032072_POPTR_    N L R Q Q T L Q Q M Q R I L T T R Q S A R A L L A I H D Y F S R L R A L S S L W L A R P R E
 
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