fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G06960.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb007418 not found in 330aa AT3G12250.2 1st_not 0.743396226 II
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G06960.1     MGDTSPRTSVSTDGDTDHNNLMFDEGHLGIGASDSSDRSKSKM-DQKTLRRLAQNREAAR
Sb007418_Sorbi1 MADASPRTETSTDDTDDNHGLEPGPGALGV-ASDSSDRSKDKHGDQKTLRRLAQNREAAR
                *.*:****..***.  *::.*  . * **: *********.*  ****************

AT5G06960.1     KSRLRKKAYVQQLENSRLKLTQLEQELQRARQQGVFISSSGDQAHSTAGDGAMAFDVEYR
Sb007418_Sorbi1 KSRLRKKAYVQQLENSRLKLTQLEQELQRARQQGIFISSSVDQSHSMSGNGALAFDMEYA
                **********************************:***** **:** :*:**:***:** 

AT5G06960.1     RWQEDKNRQMKELSSAIDSHATDSELRIIVDGVIAHYEELYRIKGNAAKSDVFHLLSGMW
Sb007418_Sorbi1 RWLEEHNRQISELRAGVSAHASDTDLRSVVDKIMSHYDEIFRLKGNAAKADVFHVLSGMW
                ** *::***:.** :.:.:**:*::** :** :::**:*::*:******:****:*****

AT5G06960.1     KTPAERCFLWLGGFRSSELLKLIASQLEPLTEQQSLDINNLQQSSQQAEDALSQGMDNLQ
Sb007418_Sorbi1 KTPAERCFLWLGGFRPSEVLKLLSTQLEPLTEQQLSGIGNLQQSSQQAEDALSQGMEALQ
                ***************.**:***:::*********  .*.*****************: **

AT5G06960.1     QSLADTLSSGTLGSSSSGNVASYMGQMAMAMGKLGTLEGFIRQADNLRLQTYQQMVRLLT
Sb007418_Sorbi1 QSLAETLAGSLSSSGSTGNVANYMGQMAMAMGKLGTLENFLRQADNLRLQTLQQMQRILT
                ****:**:..  .*.*:****.****************.*:********** *** *:**

AT5G06960.1     TRQSARALLAVHNYTLRLRALSSLWLARPRE
Sb007418_Sorbi1 TRQSARALLVISDYSSRLRALSSLWLARPKE
                *********.: :*: *************:*
BoxShade v3.31 C (beta, 970507) Output
AT5G06960.1     M G D T S P R T S V S T D G D T D H N N L M F D E G H L G I G A S D S S D R S K S K M - D Q K T L R R L A Q N R E A A R
Sb007418_Sorbi1    M A D A S P R T E T S T D D T D D N H G L E P G P G A L G V - A S D S S D R S K D K H G D Q K T L R R L A Q N R E A A R
 
AT5G06960.1     K S R L R K K A Y V Q Q L E N S R L K L T Q L E Q E L Q R A R Q Q G V F I S S S G D Q A H S T A G D G A M A F D V E Y R
Sb007418_Sorbi1    K S R L R K K A Y V Q Q L E N S R L K L T Q L E Q E L Q R A R Q Q G I F I S S S V D Q S H S M S G N G A L A F D M E Y A
 
AT5G06960.1     R W Q E D K N R Q M K E L S S A I D S H A T D S E L R I I V D G V I A H Y E E L Y R I K G N A A K S D V F H L L S G M W
Sb007418_Sorbi1    R W L E E H N R Q I S E L R A G V S A H A S D T D L R S V V D K I M S H Y D E I F R L K G N A A K A D V F H V L S G M W
 
AT5G06960.1     K T P A E R C F L W L G G F R S S E L L K L I A S Q L E P L T E Q Q S L D I N N L Q Q S S Q Q A E D A L S Q G M D N L Q
Sb007418_Sorbi1    K T P A E R C F L W L G G F R P S E V L K L L S T Q L E P L T E Q Q L S G I G N L Q Q S S Q Q A E D A L S Q G M E A L Q
 
AT5G06960.1     Q S L A D T L S S G T L G S S S S G N V A S Y M G Q M A M A M G K L G T L E G F I R Q A D N L R L Q T Y Q Q M V R L L T
Sb007418_Sorbi1    Q S L A E T L A G S L S S S G S T G N V A N Y M G Q M A M A M G K L G T L E N F L R Q A D N L R L Q T L Q Q M Q R I L T
 
AT5G06960.1     T R Q S A R A L L A V H N Y T L R L R A L S S L W L A R P R E
Sb007418_Sorbi1    T R Q S A R A L L V I S D Y S S R L R A L S S L W L A R P K E
 
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