fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G07060.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm038559 CQVCLLDLEYGLPVQVRD in 85/482 AT2G29580.1 1st_not 0.683624801 II
KLVIKGLRLKLMWGRP in 291/482
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G07060.1     MSH---RDHGADGWESADFPITCESCFGDNPYMRMTRADYDKECKICSRPFTAFRWRPGR
gm038559_Glyma1 MAHRLLRDHEADGWERSDFPIICESCLGDSPYVRMTRAEYDKECKICTRPFTVFRWRPGR
                *:*   *** ***** :**** ****:**.**:*****:********:****.*******

AT5G07060.1     NARFKKTEICQTCSKLKNVCQVCLLDLGFGLPVQVRDSALNINSHYSVPMSHVNREYFAD
gm038559_Glyma1 DARYKKTEICQTCSKLKNVCQVCLLDLEYGLPVQVRDTALNIDSHDAIPKSDVNREYFAE
                :**:*********************** :********:****:** ::* *.*******:

AT5G07060.1     EHDPKTRAGLDYESSFGKMQPNDTILKLQRRTPSYEKNRPKICSFYTIGQCKRGAECSFR
gm038559_Glyma1 EHDRRARAGIDYESSYGKVRPNDTILKLQRTTPYYKRNRAHICSFYIRGECTRGAECPYR
                *** ::***:*****:**::********** ** *::**.:*****  *:*.*****.:*

AT5G07060.1     HEMPETGELSHQNIRDRYYSVNDPVAMKLLRKAGEMGTLEPPEDESIKTLYVGGLNSRIF
gm038559_Glyma1 HEMPETGELSQQNIKDRYYGVNDPVALKLLGKAGEMNTLEAPEDESIKTLYVGGLDARVT
                **********:***:****.******:*** *****.***.**************::*: 

AT5G07060.1     EQDIHDHFYAYGEMESIRVM-------------------AED------------------
gm038559_Glyma1 EQDLRDHFYAHGEIESIKMVLQRACAFVTYTTREGAEKAAEELSNKLVIKGLRLKLMWGR
                ***::*****:**:***:::                   **:                  

AT5G07060.1     ---GKYDQSGSNQ-QQQGSIAHTGL-----ISQQQNQ-HSQMQQYYMQP--PPP--NEYS
gm038559_Glyma1 PQTSKPESDGSDQARQQASVAHSGLLPRAVISQQQNQDQTQGMVYYNNPPGPPPLQQERS
                   .* :..**:* :**.*:**:**     ******* ::*   ** :*  ***  :* *

AT5G07060.1     HYPSMDTQRMGAAFSTQES--DGSSTSENNRAYS------SYSYPM---PP----HQPYP
gm038559_Glyma1 YYPSMDPQRMGALVASQDGPPGGPSGSGENKPSSDKQQMQNYTHPMMPPPPGQYHHQYYP
                :*****.***** .::*:.  .*.* * :*:. *      .*::**   **    ** **

AT5G07060.1     ----TPP--PYIDIYIYI------------------------------------------
gm038559_Glyma1 PYGYMPPVSPYQQ---YASPYNAAVAPSQTPAANHPYQHSMQPGSGQAAHAPAESGTSTS
                     **  ** :   *                                           

AT5G07060.1     -----
gm038559_Glyma1 GSQQH
BoxShade v3.31 C (beta, 970507) Output
AT5G07060.1     M S H - - - R D H G A D G W E S A D F P I T C E S C F G D N P Y M R M T R A D Y D K E C K I C S R P F T A F R W R P G R
gm038559_Glyma1    M A H R L L R D H E A D G W E R S D F P I I C E S C L G D S P Y V R M T R A E Y D K E C K I C T R P F T V F R W R P G R
 
AT5G07060.1     N A R F K K T E I C Q T C S K L K N V C Q V C L L D L G F G L P V Q V R D S A L N I N S H Y S V P M S H V N R E Y F A D
gm038559_Glyma1    D A R Y K K T E I C Q T C S K L K N V C Q V C L L D L E Y G L P V Q V R D T A L N I D S H D A I P K S D V N R E Y F A E
 
AT5G07060.1     E H D P K T R A G L D Y E S S F G K M Q P N D T I L K L Q R R T P S Y E K N R P K I C S F Y T I G Q C K R G A E C S F R
gm038559_Glyma1    E H D R R A R A G I D Y E S S Y G K V R P N D T I L K L Q R T T P Y Y K R N R A H I C S F Y I R G E C T R G A E C P Y R
 
AT5G07060.1     H E M P E T G E L S H Q N I R D R Y Y S V N D P V A M K L L R K A G E M G T L E P P E D E S I K T L Y V G G L N S R I F
gm038559_Glyma1    H E M P E T G E L S Q Q N I K D R Y Y G V N D P V A L K L L G K A G E M N T L E A P E D E S I K T L Y V G G L D A R V T
 
AT5G07060.1     E Q D I H D H F Y A Y G E M E S I R V M - - - - - - - - - - - - - - - - - - - A E D - - - - - - - - - - - - - - - - - -
gm038559_Glyma1    E Q D L R D H F Y A H G E I E S I K M V L Q R A C A F V T Y T T R E G A E K A A E E L S N K L V I K G L R L K L M W G R
 
AT5G07060.1     - - - G K Y D Q S G S N Q - Q Q Q G S I A H T G L - - - - - I S Q Q Q N Q - H S Q M Q Q Y Y M Q P - - P P P - - N E Y S
gm038559_Glyma1    P Q T S K P E S D G S D Q A R Q Q A S V A H S G L L P R A V I S Q Q Q N Q D Q T Q G M V Y Y N N P P G P P P L Q Q E R S
 
AT5G07060.1     H Y P S M D T Q R M G A A F S T Q E S - - D G S S T S E N N R A Y S - - - - - - S Y S Y P M - - - P P - - - - H Q P Y P
gm038559_Glyma1    Y Y P S M D P Q R M G A L V A S Q D G P P G G P S G S G E N K P S S D K Q Q M Q N Y T H P M M P P P P G Q Y H H Q Y Y P
 
AT5G07060.1     - - - - T P P - - P Y I D I Y I Y I - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm038559_Glyma1    P Y G Y M P P V S P Y Q Q - - - Y A S P Y N A A V A P S Q T P A A N H P Y Q H S M Q P G S G Q A A H A P A E S G T S T S
 
AT5G07060.1     - - - - -
gm038559_Glyma1    G S Q Q H
 
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