fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G07310.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb016161 not found in 278aa AT5G07310.1 1st_1st 0.259953161 Ib
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G07310.1     ---------MANSGNYGK-------------RPF-----------RGDESDEKKEADDDE
Sb016161_Sorbi1 PDTYVKNQRTIEEYSYGRCLARAAAAHASVDRPREISAAAAAAHQQGARRDEAQAAAGGS
                           :. .**:             **            :* . ** : * ...

AT5G07310.1     -NIFPFFSARSQYDMRAMVSALTQVIGNQSSSHDNNQHQP---VVYNQQDPNPPAP---P
Sb016161_Sorbi1 GGVWWRPPLRAEDEHAVIVAALAHVVGEGRQAQ---QQQPPPVLGHGQQVMHRTAPAVEP
                 .::   . *:: :  .:*:**::*:*:  .::   *:**   : :.**  : .**   *

AT5G07310.1     TQDQGLLRKRHYRGVRQRPWGKWAAEIRDPQKAARVWLGTFETAEAAALAYDNAALKFKG
Sb016161_Sorbi1 PQQQRL----RYRGVRQRPWGKWAAEIRDPVKAARVWLGTFDTAEDAARAYDAAALRFKG
                .*:* *    :******************* **********:*** ** *** ***:***

AT5G07310.1     SKAKLNFP--ERAQLASNTSTTTGPPNYYSSNNQIYYSNPQTNPQTIPYFNQYYYNQYLH
Sb016161_Sorbi1 AKAKLNFPFQQPATTATASTSATLAPTPRQGTRHAAAAPAGAHQQEFPDLSRY---AHIL
                :*******  : *  *: ::::* .*.  ....:   : . :: * :* :.:*    :: 

AT5G07310.1     QGGNSNDALSYSLAGGETGGSMYNHQTLSTTNSSSSGGSSRQQDDEQDYARYLRFGDSSP
Sb016161_Sorbi1 QSGGDLDLQAFSGAGGLTPG-----RSSTTTASASS---------------------SSP
                *.*.. *  ::* *** * *     :: :** *:**                     ***

AT5G07310.1     PNSGF---------
Sb016161_Sorbi1 PAPSVDWFPWRGPA
                * ...
BoxShade v3.31 C (beta, 970507) Output
AT5G07310.1     - - - - - - - - - M A N S G N Y G K - - - - - - - - - - - - - R P F - - - - - - - - - - - R G D E S D E K K E A D D D E
Sb016161_Sorbi1    P D T Y V K N Q R T I E E Y S Y G R C L A R A A A A H A S V D R P R E I S A A A A A A H Q Q G A R R D E A Q A A A G G S
 
AT5G07310.1     - N I F P F F S A R S Q Y D M R A M V S A L T Q V I G N Q S S S H D N N Q H Q P - - - V V Y N Q Q D P N P P A P - - - P
Sb016161_Sorbi1    G G V W W R P P L R A E D E H A V I V A A L A H V V G E G R Q A Q - - - Q Q Q P P P V L G H G Q Q V M H R T A P A V E P
 
AT5G07310.1     T Q D Q G L L R K R H Y R G V R Q R P W G K W A A E I R D P Q K A A R V W L G T F E T A E A A A L A Y D N A A L K F K G
Sb016161_Sorbi1    P Q Q Q R L - - - - R Y R G V R Q R P W G K W A A E I R D P V K A A R V W L G T F D T A E D A A R A Y D A A A L R F K G
 
AT5G07310.1     S K A K L N F P - - E R A Q L A S N T S T T T G P P N Y Y S S N N Q I Y Y S N P Q T N P Q T I P Y F N Q Y Y Y N Q Y L H
Sb016161_Sorbi1    A K A K L N F P F Q Q P A T T A T A S T S A T L A P T P R Q G T R H A A A A P A G A H Q Q E F P D L S R Y - - - A H I L
 
AT5G07310.1     Q G G N S N D A L S Y S L A G G E T G G S M Y N H Q T L S T T N S S S S G G S S R Q Q D D E Q D Y A R Y L R F G D S S P
Sb016161_Sorbi1    Q S G G D L D L Q A F S G A G G L T P G - - - - - R S S T T T A S A S S - - - - - - - - - - - - - - - - - - - - - S S P
 
AT5G07310.1     P N S G F - - - - - - - - -
Sb016161_Sorbi1    P A P S V D W F P W R G P A
 
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