fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G07680.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm046633 not found in 350aa AT5G61430.1 1st_not 0.567883211 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G07680.1     METFGVFHKEDDEQMDLPPGFRFHPTDEELITHYLHKKVLDLGFSAKAIGEVDLNKAEPW
gm046633_Glyma1 MENVPVVCKEDD-QMDLPPGFRFHPTDEELISHYLYKKVIDTKFCARAIGEVDLNKSEPW
                **.. *. **** ******************:***:***:*  *.*:*********:***

AT5G07680.1     ELPYKAKIGEKEWYFFCVRDRKYPTGLRTNRATQAGYWKATGKDKEIFRGKSLVGMKKTL
gm046633_Glyma1 DLPWKAKMGEKEWYFFCVRDRKYPTGLRTNRATEAGYWKATGKDKEIFRGKSLVGMKKTL
                :**:***:*************************:**************************

AT5G07680.1     VFYRGRAPKGQKTNWVMHEYRLDGKLSAHNLPKTAKNEWVICRVFHKTAGGKKIPISTLI
gm046633_Glyma1 VFYRGRAPKGEKSNWVMHEYRLEGKFSVHNLPKTAKNEWVICRVFQKSSAGKKTHISGIM
                **********:*:*********:**:*.*****************:*::.***  ** ::

AT5G07680.1     RIGSYGT---GSSLPPLTDSSPY--NDKTKTEPVYVPCFSN----QAETRGTILNCFSNP
gm046633_Glyma1 RLDSFADELGSSALPPLSDSSPSIGNTKPLNDTAYVPCFSNPIDVQRNQEG-VFDSFTN-
                *:.*:.    .*:****:****   * *. .:..*******    * : .* :::.*:* 

AT5G07680.1     SLSSIQPDFLQMIP-------LYQPQSL----NISESSNPVLTQEQSVLQAMMENN-RRQ
gm046633_Glyma1 SIYAVSSNPMGILPRMPPSGSFYSTQGVQAAPNLAFPGSVYTLQDHTILRTLCENNGYKP
                *: ::..: : ::*       :*..*.:    *:: ...    *::::*::: ***  : 

AT5G07680.1     NFKTLSISQETGVS---NTDNSSVFEFGRKRFDHQEVPSPSSGPVDLEPFWNY
gm046633_Glyma1 ERDMISVSQETGLTTDINAETSSNFDMGRRPFENHNHASVSVAPLDLDGLWNY
                : . :*:*****::   *::.** *::**: *:::: .* * .*:**: :***
BoxShade v3.31 C (beta, 970507) Output
AT5G07680.1     M E T F G V F H K E D D E Q M D L P P G F R F H P T D E E L I T H Y L H K K V L D L G F S A K A I G E V D L N K A E P W
gm046633_Glyma1    M E N V P V V C K E D D - Q M D L P P G F R F H P T D E E L I S H Y L Y K K V I D T K F C A R A I G E V D L N K S E P W
 
AT5G07680.1     E L P Y K A K I G E K E W Y F F C V R D R K Y P T G L R T N R A T Q A G Y W K A T G K D K E I F R G K S L V G M K K T L
gm046633_Glyma1    D L P W K A K M G E K E W Y F F C V R D R K Y P T G L R T N R A T E A G Y W K A T G K D K E I F R G K S L V G M K K T L
 
AT5G07680.1     V F Y R G R A P K G Q K T N W V M H E Y R L D G K L S A H N L P K T A K N E W V I C R V F H K T A G G K K I P I S T L I
gm046633_Glyma1    V F Y R G R A P K G E K S N W V M H E Y R L E G K F S V H N L P K T A K N E W V I C R V F Q K S S A G K K T H I S G I M
 
AT5G07680.1     R I G S Y G T - - - G S S L P P L T D S S P Y - - N D K T K T E P V Y V P C F S N - - - - Q A E T R G T I L N C F S N P
gm046633_Glyma1    R L D S F A D E L G S S A L P P L S D S S P S I G N T K P L N D T A Y V P C F S N P I D V Q R N Q E G - V F D S F T N -
 
AT5G07680.1     S L S S I Q P D F L Q M I P - - - - - - - L Y Q P Q S L - - - - N I S E S S N P V L T Q E Q S V L Q A M M E N N - R R Q
gm046633_Glyma1    S I Y A V S S N P M G I L P R M P P S G S F Y S T Q G V Q A A P N L A F P G S V Y T L Q D H T I L R T L C E N N G Y K P
 
AT5G07680.1     N F K T L S I S Q E T G V S - - - N T D N S S V F E F G R K R F D H Q E V P S P S S G P V D L E P F W N Y
gm046633_Glyma1    E R D M I S V S Q E T G L T T D I N A E T S S N F D M G R R P F E N H N H A S V S V A P L D L D G L W N Y
 
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