fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G08190.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt027186 not found in 156aa AT5G23090.1 1st_not 0.873170731 II
Pt023529 not found in 157aa AT5G23090.1 not_not 0.848780487 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G08190.1     MDPMDIVGKSKEDASLPKATMTKIIKEMLPADVRVARDAQDLLIECCVEFINLISSESNE
pt027186_POPTR_ MEPMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNE
pt023529_POPTR_ MEPMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDTQDLLIECCVEFINLVSSESNE
                *:****************************.*******:**************:******

AT5G08190.1     VCNKEDKRTIAPEHVLKALQVLGFGEYVEEVYAAYEQHKYETMQDSQR-SVKMNSGAEMT
pt027186_POPTR_ VCSREDKRTIAPEHVLKALEVLGFGEYIEEVYAAYEQHKLETMHDSLK-GGKWSNGAAMT
pt023529_POPTR_ VCSREDKRTIAPEHVLKALQVLGFGEYIEDVYTAYEQHKLETMHDSLKGGGKWSTGAAMT
                **.:***************:*******:*:**:****** ***:** : . * ..** **

AT5G08190.1     EEEAAAEQQRMFAEARARMNGGVTVPQPEQLEEPQQQQQTSLQS
pt027186_POPTR_ EEEAAAAQQRMFDEARARMNGGVTAPK-----QPETNQ--SLKS
pt023529_POPTR_ EEEAAAAQQRMFDEARARMNGVVSAPK-----QPEANQ--SLES
                ****** ***** ******** *:.*:     :*: :*  **:*
BoxShade v3.31 C (beta, 970507) Output
AT5G08190.1     M D P M D I V G K S K E D A S L P K A T M T K I I K E M L P A D V R V A R D A Q D L L I E C C V E F I N L I S S E S N E
pt027186_POPTR_    M E P M D I V G K S K E D A S L P K A T M T K I I K E M L P P D V R V A R D A Q D L L I E C C V E F I N L V S S E S N E
pt023529_POPTR_    M E P M D I V G K S K E D A S L P K A T M T K I I K E M L P P D V R V A R D T Q D L L I E C C V E F I N L V S S E S N E
 
AT5G08190.1     V C N K E D K R T I A P E H V L K A L Q V L G F G E Y V E E V Y A A Y E Q H K Y E T M Q D S Q R - S V K M N S G A E M T
pt027186_POPTR_    V C S R E D K R T I A P E H V L K A L E V L G F G E Y I E E V Y A A Y E Q H K L E T M H D S L K - G G K W S N G A A M T
pt023529_POPTR_    V C S R E D K R T I A P E H V L K A L Q V L G F G E Y I E D V Y T A Y E Q H K L E T M H D S L K G G G K W S T G A A M T
 
AT5G08190.1     E E E A A A E Q Q R M F A E A R A R M N G G V T V P Q P E Q L E E P Q Q Q Q Q T S L Q S
pt027186_POPTR_    E E E A A A A Q Q R M F D E A R A R M N G G V T A P K - - - - - Q P E T N Q - - S L K S
pt023529_POPTR_    E E E A A A A Q Q R M F D E A R A R M N G V V S A P K - - - - - Q P E A N Q - - S L E S
 
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