fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G08330.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os010630 not found in 236aa AT5G23280.1 1st_not 0.505454545 II
Sb028280 EGREDRLRLALAVSCP in 552/659 AT5G23280.1 1st_not 0.476363636 II
Gm054250 not found in 242aa AT5G23280.1 1st_not 0.523636363 II
Pt000871 not found in 272aa AT5G23280.1 1st_not 0.465454545 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (1 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G08330.1     -MADNDGAVSNGIIVEQTSNKGPLN----------------AVKKPPSKDRHSKVD----
Os010630_Os02t0 MTTRPDGGGGGGGAPDKQLVPASNANG-----------TALAVRKPPSKDRHSKVD----
pt000871_POPTR_ -MSDNSGAVNNGALIDPQRNQPPGGGGGGG-----ATNGALAVKKPPSKDRHSKVD----
gm054250_Glyma2 -MSNSDGT-TNGAITEAQRQQQQQGG------------KALAVKKPPSKDRHSKVD----
Sb028280_Sorbi1 ---NPSGGGRDAGTGDDEELTTTLSRSAGGLLLGPAGGGGSCCGSGPAREGGEQVEVALR
                     .*   ..   :                         .  . *:::  .:*:    

AT5G08330.1     ------------------------GRG----RRIR----MPIICAARVFQLTRELGHKSD
Os010630_Os02t0 ------------------------GRG----RRIR----MPIICAARVFQLTRELGHKSD
pt000871_POPTR_ ------------------------GRG----RRIR----MPIICAARVFQLTRELGHKSD
gm054250_Glyma2 ------------------------GRG----RRIR----MPIICAARVFQLTRELGHKSD
Sb028280_Sorbi1 NGEVVADPGGGRLPGHGWCGGGGGGRGYHHLRRGREAPELAEVGPRR--QRPEPRGRGSD
                                        ***    ** *    :. : . *  * ..  *: **

AT5G08330.1     GQTIEWLLRQAEPSIIAATGTGTTPASFSTASLSTS------------------------
Os010630_Os02t0 GQTIEWLLRQAEPSIIAATGTGTTPASFSTSSPSSL---RSNS----------TSNSND-
pt000871_POPTR_ GQTIEWLLRQAEPSIIAATGTGTTPASFSTVSVSVRAGGNSNSISSLSSNNVHSAASLDH
gm054250_Glyma2 GQTIEWLLRQAEPSVIAATGTGTIPASFSSVSLSSP------------------SSTSDY
Sb028280_Sorbi1 G----------------GLGVGAVPAD----ALAED-EGRGGVREAGGGGG---------
                *                . *.*: **.    : :                          

AT5G08330.1     ---------SPFTLGKRVVRAEEGESGGGGGGGLTVGHTMGTSLMG-----GGGSGGFWA
Os010630_Os02t0 ---LLLPRAAPFILGKR-LRAADDHT----------------TSPAPAPDATAPTQAFWA
pt000871_POPTR_ KP-LLGP--APFILGKR-MRPEEDGNGGKDDGGVPVGPTIG-SLMGPTATAAAGSGGFWA
gm054250_Glyma2 KPQLLAP--TPFILGKR-IRTDEDSS---KDEAVSVGP----SLVGPYAPPGPG-----V
Sb028280_Sorbi1 --------------GQR-VRAGGGGGAERGRGGGGEGRRRG-------AGAGGGDDGGLG
                              *:* :*.  .                                    

AT5G08330.1     VPARPDFGQVWSF-A----------------TGAPPEMVF---AQQQQPATLFVRHQQQQ
Os010630_Os02t0 LPARADFGQLWSF-------------------AAAPEMMV--------------------
pt000871_POPTR_ LPARADF---WGF-A-----------------AAPPEMVVQPTAVQQ--SSLFM-HQQH-
gm054250_Glyma2 VPAWPDFGQIWSFVA----------------AAAAPEMVSVPQQQQQQ-ASLFAHHHRQQ
Sb028280_Sorbi1 LAEQPLYGLAVGLVAELPRELEHAGRADDGHADAAPTAVHLA-------VTVLGGRLADG
                :.  . :    .:                    *.*  :                     

AT5G08330.1     QASAAAAAAM---------GEASAARVGNYLP---GHHLNLLASLSGG---ANG------
Os010630_Os02t0 --AAAAAPAMP--------GEASAARVGNYLPMAQG-NLNLLASFSGG---PGGAGATAA
pt000871_POPTR_ ---AAAAAAM---------GEASAARLGNYLP---G-HLNLLASLSGG---SGS------
gm054250_Glyma2 Q-----QLAI---------GEALAARVGNYLP---G-HLNLLASLSGG---PGN------
Sb028280_Sorbi1 Q-RAGVAVAVGDRHELLVCGRGAAAAV---WPR----RHERVARTDGGCPWPGP-GPILC
                        *:         *.. ** :    *     . : :*  .**   ..       

AT5G08330.1     SGRREDDHEPR---
Os010630_Os02t0 TGRPEEESA-R---
pt000871_POPTR_ SGRREEDQR-----
gm054250_Glyma2 SGRRDDEPR-----
Sb028280_Sorbi1 GSELELEWR-REAV
                 .. : :
BoxShade v3.31 C (beta, 970507) Output
AT5G08330.1     - M A D N D G A V S N G I I V E Q T S N K G P L N - - - - - - - - - - - - - - - - A V K K P P S K D R H S K V D - - - -
Os010630_Os02t0    M T T R P D G G G G G G G A P D K Q L V P A S N A N G - - - - - - - - - - - T A L A V R K P P S K D R H S K V D - - - -
pt000871_POPTR_    - M S D N S G A V N N G A L I D P Q R N Q P P G G G G G G G - - - - - A T N G A L A V K K P P S K D R H S K V D - - - -
gm054250_Glyma2    - M S N S D G T - T N G A I T E A Q R Q Q Q Q Q G G - - - - - - - - - - - - K A L A V K K P P S K D R H S K V D - - - -
Sb028280_Sorbi1    - - - N P S G G G R D A G T G D D E E L T T T L S R S A G G L L L G P A G G G G S C C G S G P A R E G G E Q V E V A L R
 
AT5G08330.1     - - - - - - - - - - - - - - - - - - - - - - - - G R G - - - - R R I R - - - - M P I I C A A R V F Q L T R E L G H K S D
Os010630_Os02t0    - - - - - - - - - - - - - - - - - - - - - - - - G R G - - - - R R I R - - - - M P I I C A A R V F Q L T R E L G H K S D
pt000871_POPTR_    - - - - - - - - - - - - - - - - - - - - - - - - G R G - - - - R R I R - - - - M P I I C A A R V F Q L T R E L G H K S D
gm054250_Glyma2    - - - - - - - - - - - - - - - - - - - - - - - - G R G - - - - R R I R - - - - M P I I C A A R V F Q L T R E L G H K S D
Sb028280_Sorbi1    N G E V V A D P G G G R L P G H G W C G G G G G G R G Y H H L R R G R E A P E L A E V G P R R - - Q R P E P R G R G S D
 
AT5G08330.1     G Q T I E W L L R Q A E P S I I A A T G T G T T P A S F S T A S L S T S - - - - - - - - - - - - - - - - - - - - - - - -
Os010630_Os02t0    G Q T I E W L L R Q A E P S I I A A T G T G T T P A S F S T S S P S S L - - - R S N S - - - - - - - - - - T S N S N D -
pt000871_POPTR_    G Q T I E W L L R Q A E P S I I A A T G T G T T P A S F S T V S V S V R A G G N S N S I S S L S S N N V H S A A S L D H
gm054250_Glyma2    G Q T I E W L L R Q A E P S V I A A T G T G T I P A S F S S V S L S S P - - - - - - - - - - - - - - - - - - S S T S D Y
Sb028280_Sorbi1    G - - - - - - - - - - - - - - - - G L G V G A V P A D - - - - A L A E D - E G R G G V R E A G G G G G - - - - - - - - -
 
AT5G08330.1     - - - - - - - - - S P F T L G K R V V R A E E G E S G G G G G G G L T V G H T M G T S L M G - - - - - G G G S G G F W A
Os010630_Os02t0    - - - L L L P R A A P F I L G K R - L R A A D D H T - - - - - - - - - - - - - - - - T S P A P A P D A T A P T Q A F W A
pt000871_POPTR_    K P - L L G P - - A P F I L G K R - M R P E E D G N G G K D D G G V P V G P T I G - S L M G P T A T A A A G S G G F W A
gm054250_Glyma2    K P Q L L A P - - T P F I L G K R - I R T D E D S S - - - K D E A V S V G P - - - - S L V G P Y A P P G P G - - - - - V
Sb028280_Sorbi1    - - - - - - - - - - - - - - G Q R - V R A G G G G G A E R G R G G G G E G R R R G - - - - - - - A G A G G G D D G G L G
 
AT5G08330.1     V P A R P D F G Q V W S F - A - - - - - - - - - - - - - - - - T G A P P E M V F - - - A Q Q Q Q P A T L F V R H Q Q Q Q
Os010630_Os02t0    L P A R A D F G Q L W S F - - - - - - - - - - - - - - - - - - - A A A P E M M V - - - - - - - - - - - - - - - - - - - -
pt000871_POPTR_    L P A R A D F - - - W G F - A - - - - - - - - - - - - - - - - - A A P P E M V V Q P T A V Q Q - - S S L F M - H Q Q H -
gm054250_Glyma2    V P A W P D F G Q I W S F V A - - - - - - - - - - - - - - - - A A A A P E M V S V P Q Q Q Q Q Q - A S L F A H H H R Q Q
Sb028280_Sorbi1    L A E Q P L Y G L A V G L V A E L P R E L E H A G R A D D G H A D A A P T A V H L A - - - - - - - V T V L G G R L A D G
 
AT5G08330.1     Q A S A A A A A A M - - - - - - - - - G E A S A A R V G N Y L P - - - G H H L N L L A S L S G G - - - A N G - - - - - -
Os010630_Os02t0    - - A A A A A P A M P - - - - - - - - G E A S A A R V G N Y L P M A Q G - N L N L L A S F S G G - - - P G G A G A T A A
pt000871_POPTR_    - - - A A A A A A M - - - - - - - - - G E A S A A R L G N Y L P - - - G - H L N L L A S L S G G - - - S G S - - - - - -
gm054250_Glyma2    Q - - - - - Q L A I - - - - - - - - - G E A L A A R V G N Y L P - - - G - H L N L L A S L S G G - - - P G N - - - - - -
Sb028280_Sorbi1    Q - R A G V A V A V G D R H E L L V C G R G A A A A V - - - W P R - - - - R H E R V A R T D G G C P W P G P - G P I L C
 
AT5G08330.1     S G R R E D D H E P R - - -
Os010630_Os02t0    T G R P E E E S A - R - - -
pt000871_POPTR_    S G R R E E D Q R - - - - -
gm054250_Glyma2    S G R R D D E P R - - - - -
Sb028280_Sorbi1    G S E L E L E W R - R E A V
 
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