Input
| Putative repression domain
|
|
AT5G08330.1 |
not found |
|
Ortholog
| Putative repression domain
| Reverse top hit
| Relation
| Blast score ratio
| Type
|
Pt000870 |
not found in 272aa |
AT5G23280.1 |
not_not |
0.465454545 |
III |
Pt000869 |
not found in 272aa |
AT5G23280.1 |
not_not |
0.465454545 |
III |
Pt037062 |
not found in 269aa |
AT5G23280.1 |
not_not |
0.450909090 |
III |
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.
CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)
AT5G08330.1 MADNDGAVSNGIIVEQTSNKGP---------LN---AVKKPPSKDRHSKVDGRGRRIRMP
pt000870_POPTR_ MSDNSGAVNNGALIDPQRNQPPGGGGGGGA-TNGALAVKKPPSKDRHSKVDGRGRRIRMP
pt000869_POPTR_ MSDNSGAVNNGALIDPQRNQPPGGGGGGGA-TNGALAVKKPPSKDRHSKVDGRGRRIRMP
pt037062_POPTR_ MSDNSGAVNNGSLIDPQRNQPPGGGGGGGGVTNGALVAKKPPSKDRHSKVDGRGRRIRMP
*:**.***.** ::: *: * * ..**********************
AT5G08330.1 IICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTASLSTS-----
pt000870_POPTR_ IICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTVSVSVRAGGNS
pt000869_POPTR_ IICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTVSVSVRAGGNS
pt037062_POPTR_ IICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTVSVSVRAGGNS
*************************************************.*:*.
AT5G08330.1 -------------------------SPFTLGKRVVRAEEGESGGGGGGGLTVGHTMGTSL
pt000870_POPTR_ NSISSLSSNNVHSAASLDHKPLLGPAPFILGKRMRPEEDGN-GGKDDGGVPVGPTIG-SL
pt000869_POPTR_ NSISSLSSNNVHSAASLDHKPLLGPAPFILGKRMRPEEDGN-GGKDDGGVPVGPTIG-SL
pt037062_POPTR_ NSISSLSSNNIHPVGSLEHKPLLGPAPFILGKRMRPEEDGNGGGKDDDGVPVGPTIG-SL
:** ****: *:*: ** ...*:.** *:* **
AT5G08330.1 MG-----GGGSGGFWAVPARPDFGQVWSFATGAPPEMVF---AQQQQPATLFVRHQQQQQ
pt000870_POPTR_ MGPTATAAAGSGGFWALPARADF---WGF-AAAPPEMVVQPTAVQQ--SSLFM-HQQH--
pt000869_POPTR_ MGPTATAAAGSGGFWALPARADF---WGF-AAAPPEMVVQPTAVQQ--SSLFM-HQQH--
pt037062_POPTR_ MGPTAT--AGPGGFWALPARPDF---WGFAAAAPPEMVVQPTAVQQ--SSLFM-HQH---
** .*.*****:***.** *.* :.******. * ** ::**: **:
AT5G08330.1 ASAAAAAAMGEASAARVGNYLPGHHLNLLASLSGGANGSGRREDDHEPR
pt000870_POPTR_ --AAAAAAMGEASAARLGNYLPG-HLNLLASLSGGSGSSGRREEDQR--
pt000869_POPTR_ --AAAAAAMGEASAARLGNYLPG-HLNLLASLSGGSGSSGRREEDQR--
pt037062_POPTR_ -----AAAMGEASAARVGNYLPG-HLNLLASLSSGHGSSGRREDDHR--
***********:****** *********.* ..*****:*:.
BoxShade v3.31 C (beta, 970507) Output
AT5G08330.1 |
M |
A |
D |
N |
D |
G |
A |
V |
S |
N |
G |
I |
I |
V |
E |
Q |
T |
S |
N |
K |
G |
P |
- |
- |
- |
- |
- |
- |
- |
- |
- |
L |
N |
- |
- |
- |
A |
V |
K |
K |
P |
P |
S |
K |
D |
R |
H |
S |
K |
V |
D |
G |
R |
G |
R |
R |
I |
R |
M |
P |
pt000870_POPTR_ |
M |
S |
D |
N |
S |
G |
A |
V |
N |
N |
G |
A |
L |
I |
D |
P |
Q |
R |
N |
Q |
P |
P |
G |
G |
G |
G |
G |
G |
G |
A |
- |
T |
N |
G |
A |
L |
A |
V |
K |
K |
P |
P |
S |
K |
D |
R |
H |
S |
K |
V |
D |
G |
R |
G |
R |
R |
I |
R |
M |
P |
pt000869_POPTR_ |
M |
S |
D |
N |
S |
G |
A |
V |
N |
N |
G |
A |
L |
I |
D |
P |
Q |
R |
N |
Q |
P |
P |
G |
G |
G |
G |
G |
G |
G |
A |
- |
T |
N |
G |
A |
L |
A |
V |
K |
K |
P |
P |
S |
K |
D |
R |
H |
S |
K |
V |
D |
G |
R |
G |
R |
R |
I |
R |
M |
P |
pt037062_POPTR_ |
M |
S |
D |
N |
S |
G |
A |
V |
N |
N |
G |
S |
L |
I |
D |
P |
Q |
R |
N |
Q |
P |
P |
G |
G |
G |
G |
G |
G |
G |
G |
V |
T |
N |
G |
A |
L |
V |
A |
K |
K |
P |
P |
S |
K |
D |
R |
H |
S |
K |
V |
D |
G |
R |
G |
R |
R |
I |
R |
M |
P |
|
AT5G08330.1 |
I |
I |
C |
A |
A |
R |
V |
F |
Q |
L |
T |
R |
E |
L |
G |
H |
K |
S |
D |
G |
Q |
T |
I |
E |
W |
L |
L |
R |
Q |
A |
E |
P |
S |
I |
I |
A |
A |
T |
G |
T |
G |
T |
T |
P |
A |
S |
F |
S |
T |
A |
S |
L |
S |
T |
S |
- |
- |
- |
- |
- |
pt000870_POPTR_ |
I |
I |
C |
A |
A |
R |
V |
F |
Q |
L |
T |
R |
E |
L |
G |
H |
K |
S |
D |
G |
Q |
T |
I |
E |
W |
L |
L |
R |
Q |
A |
E |
P |
S |
I |
I |
A |
A |
T |
G |
T |
G |
T |
T |
P |
A |
S |
F |
S |
T |
V |
S |
V |
S |
V |
R |
A |
G |
G |
N |
S |
pt000869_POPTR_ |
I |
I |
C |
A |
A |
R |
V |
F |
Q |
L |
T |
R |
E |
L |
G |
H |
K |
S |
D |
G |
Q |
T |
I |
E |
W |
L |
L |
R |
Q |
A |
E |
P |
S |
I |
I |
A |
A |
T |
G |
T |
G |
T |
T |
P |
A |
S |
F |
S |
T |
V |
S |
V |
S |
V |
R |
A |
G |
G |
N |
S |
pt037062_POPTR_ |
I |
I |
C |
A |
A |
R |
V |
F |
Q |
L |
T |
R |
E |
L |
G |
H |
K |
S |
D |
G |
Q |
T |
I |
E |
W |
L |
L |
R |
Q |
A |
E |
P |
S |
I |
I |
A |
A |
T |
G |
T |
G |
T |
T |
P |
A |
S |
F |
S |
T |
V |
S |
V |
S |
V |
R |
A |
G |
G |
N |
S |
|
AT5G08330.1 |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
S |
P |
F |
T |
L |
G |
K |
R |
V |
V |
R |
A |
E |
E |
G |
E |
S |
G |
G |
G |
G |
G |
G |
G |
L |
T |
V |
G |
H |
T |
M |
G |
T |
S |
L |
pt000870_POPTR_ |
N |
S |
I |
S |
S |
L |
S |
S |
N |
N |
V |
H |
S |
A |
A |
S |
L |
D |
H |
K |
P |
L |
L |
G |
P |
A |
P |
F |
I |
L |
G |
K |
R |
M |
R |
P |
E |
E |
D |
G |
N |
- |
G |
G |
K |
D |
D |
G |
G |
V |
P |
V |
G |
P |
T |
I |
G |
- |
S |
L |
pt000869_POPTR_ |
N |
S |
I |
S |
S |
L |
S |
S |
N |
N |
V |
H |
S |
A |
A |
S |
L |
D |
H |
K |
P |
L |
L |
G |
P |
A |
P |
F |
I |
L |
G |
K |
R |
M |
R |
P |
E |
E |
D |
G |
N |
- |
G |
G |
K |
D |
D |
G |
G |
V |
P |
V |
G |
P |
T |
I |
G |
- |
S |
L |
pt037062_POPTR_ |
N |
S |
I |
S |
S |
L |
S |
S |
N |
N |
I |
H |
P |
V |
G |
S |
L |
E |
H |
K |
P |
L |
L |
G |
P |
A |
P |
F |
I |
L |
G |
K |
R |
M |
R |
P |
E |
E |
D |
G |
N |
G |
G |
G |
K |
D |
D |
D |
G |
V |
P |
V |
G |
P |
T |
I |
G |
- |
S |
L |
|
AT5G08330.1 |
M |
G |
- |
- |
- |
- |
- |
G |
G |
G |
S |
G |
G |
F |
W |
A |
V |
P |
A |
R |
P |
D |
F |
G |
Q |
V |
W |
S |
F |
A |
T |
G |
A |
P |
P |
E |
M |
V |
F |
- |
- |
- |
A |
Q |
Q |
Q |
Q |
P |
A |
T |
L |
F |
V |
R |
H |
Q |
Q |
Q |
Q |
Q |
pt000870_POPTR_ |
M |
G |
P |
T |
A |
T |
A |
A |
A |
G |
S |
G |
G |
F |
W |
A |
L |
P |
A |
R |
A |
D |
F |
- |
- |
- |
W |
G |
F |
- |
A |
A |
A |
P |
P |
E |
M |
V |
V |
Q |
P |
T |
A |
V |
Q |
Q |
- |
- |
S |
S |
L |
F |
M |
- |
H |
Q |
Q |
H |
- |
- |
pt000869_POPTR_ |
M |
G |
P |
T |
A |
T |
A |
A |
A |
G |
S |
G |
G |
F |
W |
A |
L |
P |
A |
R |
A |
D |
F |
- |
- |
- |
W |
G |
F |
- |
A |
A |
A |
P |
P |
E |
M |
V |
V |
Q |
P |
T |
A |
V |
Q |
Q |
- |
- |
S |
S |
L |
F |
M |
- |
H |
Q |
Q |
H |
- |
- |
pt037062_POPTR_ |
M |
G |
P |
T |
A |
T |
- |
- |
A |
G |
P |
G |
G |
F |
W |
A |
L |
P |
A |
R |
P |
D |
F |
- |
- |
- |
W |
G |
F |
A |
A |
A |
A |
P |
P |
E |
M |
V |
V |
Q |
P |
T |
A |
V |
Q |
Q |
- |
- |
S |
S |
L |
F |
M |
- |
H |
Q |
H |
- |
- |
- |
|
AT5G08330.1 |
A |
S |
A |
A |
A |
A |
A |
A |
M |
G |
E |
A |
S |
A |
A |
R |
V |
G |
N |
Y |
L |
P |
G |
H |
H |
L |
N |
L |
L |
A |
S |
L |
S |
G |
G |
A |
N |
G |
S |
G |
R |
R |
E |
D |
D |
H |
E |
P |
R |
pt000870_POPTR_ |
- |
- |
A |
A |
A |
A |
A |
A |
M |
G |
E |
A |
S |
A |
A |
R |
L |
G |
N |
Y |
L |
P |
G |
- |
H |
L |
N |
L |
L |
A |
S |
L |
S |
G |
G |
S |
G |
S |
S |
G |
R |
R |
E |
E |
D |
Q |
R |
- |
- |
pt000869_POPTR_ |
- |
- |
A |
A |
A |
A |
A |
A |
M |
G |
E |
A |
S |
A |
A |
R |
L |
G |
N |
Y |
L |
P |
G |
- |
H |
L |
N |
L |
L |
A |
S |
L |
S |
G |
G |
S |
G |
S |
S |
G |
R |
R |
E |
E |
D |
Q |
R |
- |
- |
pt037062_POPTR_ |
- |
- |
- |
- |
- |
A |
A |
A |
M |
G |
E |
A |
S |
A |
A |
R |
V |
G |
N |
Y |
L |
P |
G |
- |
H |
L |
N |
L |
L |
A |
S |
L |
S |
S |
G |
H |
G |
S |
S |
G |
R |
R |
E |
D |
D |
H |
R |
- |
- |
|
|