fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G08330.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt000871 not found in 272aa AT5G23280.1 1st_not 0.465454545 II
Pt000870 not found in 272aa AT5G23280.1 not_not 0.465454545 III
Pt000869 not found in 272aa AT5G23280.1 not_not 0.465454545 III
Pt037062 not found in 269aa AT5G23280.1 not_not 0.450909090 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G08330.1     MADNDGAVSNGIIVEQTSNKGP---------LN---AVKKPPSKDRHSKVDGRGRRIRMP
pt000870_POPTR_ MSDNSGAVNNGALIDPQRNQPPGGGGGGGA-TNGALAVKKPPSKDRHSKVDGRGRRIRMP
pt000869_POPTR_ MSDNSGAVNNGALIDPQRNQPPGGGGGGGA-TNGALAVKKPPSKDRHSKVDGRGRRIRMP
pt037062_POPTR_ MSDNSGAVNNGSLIDPQRNQPPGGGGGGGGVTNGALVAKKPPSKDRHSKVDGRGRRIRMP
pt000871_POPTR_ MSDNSGAVNNGALIDPQRNQPPGGGGGGGA-TNGALAVKKPPSKDRHSKVDGRGRRIRMP
                *:**.***.** :::   *: *          *   ..**********************

AT5G08330.1     IICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTASLSTS-----
pt000870_POPTR_ IICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTVSVSVRAGGNS
pt000869_POPTR_ IICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTVSVSVRAGGNS
pt037062_POPTR_ IICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTVSVSVRAGGNS
pt000871_POPTR_ IICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTVSVSVRAGGNS
                *************************************************.*:*.      

AT5G08330.1     -------------------------SPFTLGKRVVRAEEGESGGGGGGGLTVGHTMGTSL
pt000870_POPTR_ NSISSLSSNNVHSAASLDHKPLLGPAPFILGKRMRPEEDGN-GGKDDGGVPVGPTIG-SL
pt000869_POPTR_ NSISSLSSNNVHSAASLDHKPLLGPAPFILGKRMRPEEDGN-GGKDDGGVPVGPTIG-SL
pt037062_POPTR_ NSISSLSSNNIHPVGSLEHKPLLGPAPFILGKRMRPEEDGNGGGKDDDGVPVGPTIG-SL
pt000871_POPTR_ NSISSLSSNNVHSAASLDHKPLLGPAPFILGKRMRPEEDGN-GGKDDGGVPVGPTIG-SL
                                         :** ****:   *:*: ** ...*:.** *:* **

AT5G08330.1     MG-----GGGSGGFWAVPARPDFGQVWSFATGAPPEMVF---AQQQQPATLFVRHQQQQQ
pt000870_POPTR_ MGPTATAAAGSGGFWALPARADF---WGF-AAAPPEMVVQPTAVQQ--SSLFM-HQQH--
pt000869_POPTR_ MGPTATAAAGSGGFWALPARADF---WGF-AAAPPEMVVQPTAVQQ--SSLFM-HQQH--
pt037062_POPTR_ MGPTAT--AGPGGFWALPARPDF---WGFAAAAPPEMVVQPTAVQQ--SSLFM-HQH---
pt000871_POPTR_ MGPTATAAAGSGGFWALPARADF---WGF-AAAPPEMVVQPTAVQQ--SSLFM-HQQH--
                **      .*.*****:***.**   *.* :.******.   * **  ::**: **:   

AT5G08330.1     ASAAAAAAMGEASAARVGNYLPGHHLNLLASLSGGANGSGRREDDHEPR
pt000870_POPTR_ --AAAAAAMGEASAARLGNYLPG-HLNLLASLSGGSGSSGRREEDQR--
pt000869_POPTR_ --AAAAAAMGEASAARLGNYLPG-HLNLLASLSGGSGSSGRREEDQR--
pt037062_POPTR_ -----AAAMGEASAARVGNYLPG-HLNLLASLSSGHGSSGRREDDHR--
pt000871_POPTR_ --AAAAAAMGEASAARLGNYLPG-HLNLLASLSGGSGSSGRREEDQR--
                     ***********:****** *********.* ..*****:*:.
BoxShade v3.31 C (beta, 970507) Output
AT5G08330.1     M A D N D G A V S N G I I V E Q T S N K G P - - - - - - - - - L N - - - A V K K P P S K D R H S K V D G R G R R I R M P
pt000870_POPTR_    M S D N S G A V N N G A L I D P Q R N Q P P G G G G G G G A - T N G A L A V K K P P S K D R H S K V D G R G R R I R M P
pt000869_POPTR_    M S D N S G A V N N G A L I D P Q R N Q P P G G G G G G G A - T N G A L A V K K P P S K D R H S K V D G R G R R I R M P
pt037062_POPTR_    M S D N S G A V N N G S L I D P Q R N Q P P G G G G G G G G V T N G A L V A K K P P S K D R H S K V D G R G R R I R M P
pt000871_POPTR_    M S D N S G A V N N G A L I D P Q R N Q P P G G G G G G G A - T N G A L A V K K P P S K D R H S K V D G R G R R I R M P
 
AT5G08330.1     I I C A A R V F Q L T R E L G H K S D G Q T I E W L L R Q A E P S I I A A T G T G T T P A S F S T A S L S T S - - - - -
pt000870_POPTR_    I I C A A R V F Q L T R E L G H K S D G Q T I E W L L R Q A E P S I I A A T G T G T T P A S F S T V S V S V R A G G N S
pt000869_POPTR_    I I C A A R V F Q L T R E L G H K S D G Q T I E W L L R Q A E P S I I A A T G T G T T P A S F S T V S V S V R A G G N S
pt037062_POPTR_    I I C A A R V F Q L T R E L G H K S D G Q T I E W L L R Q A E P S I I A A T G T G T T P A S F S T V S V S V R A G G N S
pt000871_POPTR_    I I C A A R V F Q L T R E L G H K S D G Q T I E W L L R Q A E P S I I A A T G T G T T P A S F S T V S V S V R A G G N S
 
AT5G08330.1     - - - - - - - - - - - - - - - - - - - - - - - - - S P F T L G K R V V R A E E G E S G G G G G G G L T V G H T M G T S L
pt000870_POPTR_    N S I S S L S S N N V H S A A S L D H K P L L G P A P F I L G K R M R P E E D G N - G G K D D G G V P V G P T I G - S L
pt000869_POPTR_    N S I S S L S S N N V H S A A S L D H K P L L G P A P F I L G K R M R P E E D G N - G G K D D G G V P V G P T I G - S L
pt037062_POPTR_    N S I S S L S S N N I H P V G S L E H K P L L G P A P F I L G K R M R P E E D G N G G G K D D D G V P V G P T I G - S L
pt000871_POPTR_    N S I S S L S S N N V H S A A S L D H K P L L G P A P F I L G K R M R P E E D G N - G G K D D G G V P V G P T I G - S L
 
AT5G08330.1     M G - - - - - G G G S G G F W A V P A R P D F G Q V W S F A T G A P P E M V F - - - A Q Q Q Q P A T L F V R H Q Q Q Q Q
pt000870_POPTR_    M G P T A T A A A G S G G F W A L P A R A D F - - - W G F - A A A P P E M V V Q P T A V Q Q - - S S L F M - H Q Q H - -
pt000869_POPTR_    M G P T A T A A A G S G G F W A L P A R A D F - - - W G F - A A A P P E M V V Q P T A V Q Q - - S S L F M - H Q Q H - -
pt037062_POPTR_    M G P T A T - - A G P G G F W A L P A R P D F - - - W G F A A A A P P E M V V Q P T A V Q Q - - S S L F M - H Q H - - -
pt000871_POPTR_    M G P T A T A A A G S G G F W A L P A R A D F - - - W G F - A A A P P E M V V Q P T A V Q Q - - S S L F M - H Q Q H - -
 
AT5G08330.1     A S A A A A A A M G E A S A A R V G N Y L P G H H L N L L A S L S G G A N G S G R R E D D H E P R
pt000870_POPTR_    - - A A A A A A M G E A S A A R L G N Y L P G - H L N L L A S L S G G S G S S G R R E E D Q R - -
pt000869_POPTR_    - - A A A A A A M G E A S A A R L G N Y L P G - H L N L L A S L S G G S G S S G R R E E D Q R - -
pt037062_POPTR_    - - - - - A A A M G E A S A A R V G N Y L P G - H L N L L A S L S S G H G S S G R R E D D H R - -
pt000871_POPTR_    - - A A A A A A M G E A S A A R L G N Y L P G - H L N L L A S L S G G S G S S G R R E E D Q R - -
 
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