fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G08330.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os010630 not found in 236aa AT5G23280.1 1st_not 0.505454545 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G08330.1     -MADNDGAVSNG-----IIVEQTSNKGPLNAVKKPPSKDRHSKVDGRGRRIRMPIICAAR
Os010630_Os02t0 MTTRPDGGGGGGGAPDKQLVPASNANGTALAVRKPPSKDRHSKVDGRGRRIRMPIICAAR
                  :  **. ..*      :*  :. :*.  **:***************************

AT5G08330.1     VFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTASLST------------
Os010630_Os02t0 VFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTSSPSSLRSNSTSNSNDL
                *******************************************:* *:            

AT5G08330.1     ----SSPFTLGKRVVRAEEGESGGGGGGGLTVGHTMGTSLM--GGGGSGGFWAVPARPDF
Os010630_Os02t0 LLPRAAPFILGKRLRAADD--------------HTTSPAPAPDATAPTQAFWALPARADF
                    ::** ****:  *::              ** ..:    . . : .***:***.**

AT5G08330.1     GQVWSFATGAPPEMVFAQQQQPATLFVRHQQQQQASAAAAAAM-GEASAARVGNYLP--G
Os010630_Os02t0 GQLWSFA--AAPEMMVA-------------------AAAAPAMPGEASAARVGNYLPMAQ
                **:****  *.***:.*                   ****.** *************   

AT5G08330.1     HHLNLLASLSGGANGSGR-----REDDHEPR
Os010630_Os02t0 GNLNLLASFSGGPGGAGATAATGRPEEESAR
                 :******:***..*:*      * ::...*
BoxShade v3.31 C (beta, 970507) Output
AT5G08330.1     - M A D N D G A V S N G - - - - - I I V E Q T S N K G P L N A V K K P P S K D R H S K V D G R G R R I R M P I I C A A R
Os010630_Os02t0    M T T R P D G G G G G G G A P D K Q L V P A S N A N G T A L A V R K P P S K D R H S K V D G R G R R I R M P I I C A A R
 
AT5G08330.1     V F Q L T R E L G H K S D G Q T I E W L L R Q A E P S I I A A T G T G T T P A S F S T A S L S T - - - - - - - - - - - -
Os010630_Os02t0    V F Q L T R E L G H K S D G Q T I E W L L R Q A E P S I I A A T G T G T T P A S F S T S S P S S L R S N S T S N S N D L
 
AT5G08330.1     - - - - S S P F T L G K R V V R A E E G E S G G G G G G G L T V G H T M G T S L M - - G G G G S G G F W A V P A R P D F
Os010630_Os02t0    L L P R A A P F I L G K R L R A A D D - - - - - - - - - - - - - - H T T S P A P A P D A T A P T Q A F W A L P A R A D F
 
AT5G08330.1     G Q V W S F A T G A P P E M V F A Q Q Q Q P A T L F V R H Q Q Q Q Q A S A A A A A A M - G E A S A A R V G N Y L P - - G
Os010630_Os02t0    G Q L W S F A - - A A P E M M V A - - - - - - - - - - - - - - - - - - - A A A A P A M P G E A S A A R V G N Y L P M A Q
 
AT5G08330.1     H H L N L L A S L S G G A N G S G R - - - - - R E D D H E P R
Os010630_Os02t0    G N L N L L A S F S G G P G G A G A T A A T G R P E E E S A R
 
0