fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G08330.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb028280 EGREDRLRLALAVSCP in 552/659 AT5G23280.1 1st_not 0.476363636 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G08330.1     ----------MADNDGAVSN------GIIVEQTSNKGPLNAVKKPPSKDRHSKVD-----
Sb028280_Sorbi1 NPSGGGRDAGTGDDEELTTTLSRSAGGLLLGPAGGGG--SCCGSGPAREGGEQVEVALRN
                           .*::  .:.      *:::  :.. *  ..  . *:::  .:*:     

AT5G08330.1     -----------------------GRG----RRIR----MPIICAARVFQLTRELGHKSDG
Sb028280_Sorbi1 GEVVADPGGGRLPGHGWCGGGGGGRGYHHLRRGREAPELAEVGPRR--QRPEPRGRGSDG
                                       ***    ** *    :. : . *  * ..  *: ***

AT5G08330.1     QTIEWLLRQAEPSIIAATGTGTTPASFSTASLSTSSPFTLGKRVVRAEEGESGG-----G
Sb028280_Sorbi1 ----------------GLGVGAVPAD----ALAEDE----GRGGVREAGGGGGGQRVRAG
                                . *.*:.**.    :*: ..    *:  **   * .**     *

AT5G08330.1     GGGGLTVGHTMG------TSLMGGGGSGGFWAVPARPDFGQVWSFATGAPPEMVFAQQQQ
Sb028280_Sorbi1 GGGGAERGRGGGGEGRRRGAGAGGGDDGGL-GLAEQPLYGLAVGLVAELPRELEHAGRAD
                ****   *:  *       :  ***..**: .:. :* :* . .:.:  * *: .* : :

AT5G08330.1     -------PATLFV-------RHQQQQQASAAAAAA-------MGEASAARVGNYLPGHHL
Sb028280_Sorbi1 DGHADAAPTAVHLAVTVLGGRLADGQRAGVAVAVGDRHELLVCGRGAAAAV---WPRRH-
                       *:::.:       *  : *:*..*.*..        *..:** *    * :* 

AT5G08330.1     NLLASLSGGANGSG--------------RREDDHEPR
Sb028280_Sorbi1 ERVARTDGGCPWPGPGPILCGSELELEWRREAV----
                : :*  .**.  .*              ***
BoxShade v3.31 C (beta, 970507) Output
AT5G08330.1     - - - - - - - - - - M A D N D G A V S N - - - - - - G I I V E Q T S N K G P L N A V K K P P S K D R H S K V D - - - - -
Sb028280_Sorbi1    N P S G G G R D A G T G D D E E L T T T L S R S A G G L L L G P A G G G G - - S C C G S G P A R E G G E Q V E V A L R N
 
AT5G08330.1     - - - - - - - - - - - - - - - - - - - - - - - G R G - - - - R R I R - - - - M P I I C A A R V F Q L T R E L G H K S D G
Sb028280_Sorbi1    G E V V A D P G G G R L P G H G W C G G G G G G R G Y H H L R R G R E A P E L A E V G P R R - - Q R P E P R G R G S D G
 
AT5G08330.1     Q T I E W L L R Q A E P S I I A A T G T G T T P A S F S T A S L S T S S P F T L G K R V V R A E E G E S G G - - - - - G
Sb028280_Sorbi1    - - - - - - - - - - - - - - - - G L G V G A V P A D - - - - A L A E D E - - - - G R G G V R E A G G G G G G Q R V R A G
 
AT5G08330.1     G G G G L T V G H T M G - - - - - - T S L M G G G G S G G F W A V P A R P D F G Q V W S F A T G A P P E M V F A Q Q Q Q
Sb028280_Sorbi1    G G G G A E R G R G G G G E G R R R G A G A G G G D D G G L - G L A E Q P L Y G L A V G L V A E L P R E L E H A G R A D
 
AT5G08330.1     - - - - - - - P A T L F V - - - - - - - R H Q Q Q Q Q A S A A A A A A - - - - - - - M G E A S A A R V G N Y L P G H H L
Sb028280_Sorbi1    D G H A D A A P T A V H L A V T V L G G R L A D G Q R A G V A V A V G D R H E L L V C G R G A A A A V - - - W P R R H -
 
AT5G08330.1     N L L A S L S G G A N G S G - - - - - - - - - - - - - - R R E D D H E P R
Sb028280_Sorbi1    E R V A R T D G G C P W P G P G P I L C G S E L E L E W R R E A V - - - -
 
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