fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G08520.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sm005881 not found in 181aa AT5G08520.1 1st_1st 0.340277777 Ib
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G08520.1     MTVEEVSDGSVWSREDDIAFERALANNTDESEE-------RWEKIAADVPGKSVEQIKEH
Sm005881_Selmo1 -----SPSAAKWSSEQDKLFEKALAGWEDKCDDPEGVAGSRWEAVAALVPGKTAADVRAH
                      ...: ** *:*  **:***.  *:.::       *** :** ****:. ::: *

AT5G08520.1     YELLVEDVTRIESGCVPLPAYGSPEGSNGHAGDEGASSKKGGNSHAGESNQAGKSKSDQE
Sm005881_Selmo1 YELLLRDISSIEAGLIALPCY-SPRDALLVKDSSLALDKKLGLP------SSSCSSPDQE
                ****:.*:: **:* :.**.* **..:    ... * .** * .      .:. *..***

AT5G08520.1     RRKGIAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKD
Sm005881_Selmo1 RRKGIPWTEDEHRLFLLGLEKFGKGDWRSISRNFVVSRTPTQVASHAQKYFIRLNSIHKD
                *****.*************:*:**************:*******************::**

AT5G08520.1     RRRSSIHDITSVGNADVSTPQGPITGQNNSNNNNNNNNNNSSPAVAGGGNKSAKQAVSQA
Sm005881_Selmo1 KRRTSIHDITSVN-----------------------------------------------
                :**:********.                                               

AT5G08520.1     PPGPPMYGTPAIGQPAVGTPVNLPAPPHMAYGVHAAPVPGSVVPGAAMNIGQMPYTMPRT
Sm005881_Selmo1 ------------------------------------------------------------
                                                                            

AT5G08520.1     PTAHR
Sm005881_Selmo1 -----
BoxShade v3.31 C (beta, 970507) Output
AT5G08520.1     M T V E E V S D G S V W S R E D D I A F E R A L A N N T D E S E E - - - - - - - R W E K I A A D V P G K S V E Q I K E H
Sm005881_Selmo1    - - - - - S P S A A K W S S E Q D K L F E K A L A G W E D K C D D P E G V A G S R W E A V A A L V P G K T A A D V R A H
 
AT5G08520.1     Y E L L V E D V T R I E S G C V P L P A Y G S P E G S N G H A G D E G A S S K K G G N S H A G E S N Q A G K S K S D Q E
Sm005881_Selmo1    Y E L L L R D I S S I E A G L I A L P C Y - S P R D A L L V K D S S L A L D K K L G L P - - - - - - S S S C S S P D Q E
 
AT5G08520.1     R R K G I A W T E D E H R L F L L G L D K Y G K G D W R S I S R N F V V T R T P T Q V A S H A Q K Y F I R L N S M N K D
Sm005881_Selmo1    R R K G I P W T E D E H R L F L L G L E K F G K G D W R S I S R N F V V S R T P T Q V A S H A Q K Y F I R L N S I H K D
 
AT5G08520.1     R R R S S I H D I T S V G N A D V S T P Q G P I T G Q N N S N N N N N N N N N N S S P A V A G G G N K S A K Q A V S Q A
Sm005881_Selmo1    K R R T S I H D I T S V N - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT5G08520.1     P P G P P M Y G T P A I G Q P A V G T P V N L P A P P H M A Y G V H A A P V P G S V V P G A A M N I G Q M P Y T M P R T
Sm005881_Selmo1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT5G08520.1     P T A H R
Sm005881_Selmo1    - - - - -
 
0