fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G08520.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt023752 not found in 293aa AT1G49010.1 not_not 0.432291666 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G08520.1     MTVEEVSDGSVWSREDDIAFERALANN--TDESEERWEKIAADVPGKSVEQIKEHYELLV
pt023752_POPTR_ -----MASVGTWTRDEEKTFENAIAMHWIDEDSNEQWEKIASMVPSKSLEELKLHYKILV
                     ::. ..*:*::: :**.*:* :   ::*:*:*****: **.**:*::* **::**

AT5G08520.1     EDVTRIESGCVPLPAYGSPEGSNGHAGDEGASSKKG------------------------
pt023752_POPTR_ EDVCAIEAGNVPIPNY---------EGEEAASSTKDLHGLSGTMTTVKKLNCGYGSGFVG
                ***  **:* **:* *          *:*.***.*.                        

AT5G08520.1     -GNSHAGESNQAGKSKSDQERRKGIAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTP
pt023752_POPTR_ LGHESSGHGGK-GASRSEQERKKGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVISRTP
                 *:. :*...: * *:*:***:***.***:***********:*************::***

AT5G08520.1     TQVASHAQKYFIRLNSMNKDRRRSSIHDITSVGNADVSTPQGPITGQNNSNNNNNNNNNN
pt023752_POPTR_ TQVASHAQKYFIRLNSMNRDRRRSSIHDITSLNNGDVSSHQAPITGQ-------QANTSP
                ******************:************:.*.***: *.*****       : *.. 

AT5G08520.1     SSPAVAGGGNKSAKQAVSQAPPGPPMYGTPAIGQP----------AVGTPVNLPAPPHMA
pt023752_POPTR_ AGPAPAMG--PPVKHRTQAHMPGLAMYG-PPLGHPVAPPPGHMASAVGTPVMLPPPGHH-
                :.** * *   ..*: ..   ** .*** *.:*:*          ****** **.* *  

AT5G08520.1     YGVHAAPVPGSVVPGAAMNIGQMPYTMPRTPTAHR
pt023752_POPTR_ ------PHPPYVVPVA------YPTAPPKTA----
                      * *  *** *       * : *:*.
BoxShade v3.31 C (beta, 970507) Output
AT5G08520.1     M T V E E V S D G S V W S R E D D I A F E R A L A N N - - T D E S E E R W E K I A A D V P G K S V E Q I K E H Y E L L V
pt023752_POPTR_    - - - - - M A S V G T W T R D E E K T F E N A I A M H W I D E D S N E Q W E K I A S M V P S K S L E E L K L H Y K I L V
 
AT5G08520.1     E D V T R I E S G C V P L P A Y G S P E G S N G H A G D E G A S S K K G - - - - - - - - - - - - - - - - - - - - - - - -
pt023752_POPTR_    E D V C A I E A G N V P I P N Y - - - - - - - - - E G E E A A S S T K D L H G L S G T M T T V K K L N C G Y G S G F V G
 
AT5G08520.1     - G N S H A G E S N Q A G K S K S D Q E R R K G I A W T E D E H R L F L L G L D K Y G K G D W R S I S R N F V V T R T P
pt023752_POPTR_    L G H E S S G H G G K - G A S R S E Q E R K K G I P W T E E E H R L F L L G L D K F G K G D W R S I S R N F V I S R T P
 
AT5G08520.1     T Q V A S H A Q K Y F I R L N S M N K D R R R S S I H D I T S V G N A D V S T P Q G P I T G Q N N S N N N N N N N N N N
pt023752_POPTR_    T Q V A S H A Q K Y F I R L N S M N R D R R R S S I H D I T S L N N G D V S S H Q A P I T G Q - - - - - - - Q A N T S P
 
AT5G08520.1     S S P A V A G G G N K S A K Q A V S Q A P P G P P M Y G T P A I G Q P - - - - - - - - - - A V G T P V N L P A P P H M A
pt023752_POPTR_    A G P A P A M G - - P P V K H R T Q A H M P G L A M Y G - P P L G H P V A P P P G H M A S A V G T P V M L P P P G H H -
 
AT5G08520.1     Y G V H A A P V P G S V V P G A A M N I G Q M P Y T M P R T P T A H R
pt023752_POPTR_    - - - - - - P H P P Y V V P V A - - - - - - Y P T A P P K T A - - - -
 
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