fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G08520.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt036888 not found in 296aa AT5G08520.1 1st_1st 0.671875 Ia
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G08520.1     MTVEEVSDGSVWSREDDIAFERALANNTDESEERWEKIAADVPGKSVEQIKEHYELLVED
pt036888_POPTR_ MSVDEGGSGSLWTREHDKAFENALATYPEDASDRWEKIAEDVPGKTLEEIKHHYELLVED
                *:*:* ..**:*:**.* ***.***. .:::.:****** *****::*:**.********

AT5G08520.1     VTRIESGCVPLPAY-GSPEGSNGHAGDEGASSKKGGN--SHAGESNQAGK-SKSDQERRK
pt036888_POPTR_ INQIEAGCVPLPCYSSSSEGSTSHAGDEG-TGKKGGHLGHHNSESNHGNKASRSDQERRK
                :.:**:******.* .*.***..****** :.****:   * .***:..* *:*******

AT5G08520.1     GIAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRR
pt036888_POPTR_ GIAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRR
                ************************************************************

AT5G08520.1     SSIHDITSVGNADVSTPQGPITGQNNSNNNNNNNNNNSSPAVAGGGNKSAKQAVSQAPPG
pt036888_POPTR_ SSIHDITSVGNGDIATPQGPITGQTNGS------------AVAGSSGKAAKQPPPH-PAG
                ***********.*::*********.*..            ****...*:***. .: *.*

AT5G08520.1     PP---MYGTPAIGQP-------AVGTPVNLPAPPHMAYGVHAAPVPGSVVPGAAMNIGQM
pt036888_POPTR_ PPGVGIYGPPTIGQPIGGPLVSAVGTPVNLSAPAHMAYGVR-APVPGAMVPGAPMNMGPM
                **   :**.*:****       ********.**.******: *****::****.**:* *

AT5G08520.1     PYTMPRTPTAHR
pt036888_POPTR_ TYPMPPT-TTHR
                .*.** * *:**
BoxShade v3.31 C (beta, 970507) Output
AT5G08520.1     M T V E E V S D G S V W S R E D D I A F E R A L A N N T D E S E E R W E K I A A D V P G K S V E Q I K E H Y E L L V E D
pt036888_POPTR_    M S V D E G G S G S L W T R E H D K A F E N A L A T Y P E D A S D R W E K I A E D V P G K T L E E I K H H Y E L L V E D
 
AT5G08520.1     V T R I E S G C V P L P A Y - G S P E G S N G H A G D E G A S S K K G G N - - S H A G E S N Q A G K - S K S D Q E R R K
pt036888_POPTR_    I N Q I E A G C V P L P C Y S S S S E G S T S H A G D E G - T G K K G G H L G H H N S E S N H G N K A S R S D Q E R R K
 
AT5G08520.1     G I A W T E D E H R L F L L G L D K Y G K G D W R S I S R N F V V T R T P T Q V A S H A Q K Y F I R L N S M N K D R R R
pt036888_POPTR_    G I A W T E D E H R L F L L G L D K Y G K G D W R S I S R N F V V T R T P T Q V A S H A Q K Y F I R L N S M N K D R R R
 
AT5G08520.1     S S I H D I T S V G N A D V S T P Q G P I T G Q N N S N N N N N N N N N N S S P A V A G G G N K S A K Q A V S Q A P P G
pt036888_POPTR_    S S I H D I T S V G N G D I A T P Q G P I T G Q T N G S - - - - - - - - - - - - A V A G S S G K A A K Q P P P H - P A G
 
AT5G08520.1     P P - - - M Y G T P A I G Q P - - - - - - - A V G T P V N L P A P P H M A Y G V H A A P V P G S V V P G A A M N I G Q M
pt036888_POPTR_    P P G V G I Y G P P T I G Q P I G G P L V S A V G T P V N L S A P A H M A Y G V R - A P V P G A M V P G A P M N M G P M
 
AT5G08520.1     P Y T M P R T P T A H R
pt036888_POPTR_    T Y P M P P T - T T H R
 
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