fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G08520.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os019521 not found in 318aa AT5G08520.1 1st_1st 0.53125 Ia
Os019520 not found in 318aa AT5G08520.1 not_1st 0.53125 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G08520.1     MTVEEVSD---------------------GSVWSREDDIAFERALANNTDESEE---RWE
Os019520_Os04t0 MAVEEASSSSGGGRGGGGGGGGEEGLSGCGGGWTREREKAFENALATVGDDEEEGDGLWE
Os019521_Os04t0 MAVEEASSSSGGGRGGGGGGGGEEGLSGCGGGWTREREKAFENALATVGDDEEEGDGLWE
                *:***.*.                     *. *:** : ***.***.  *:.**    **

AT5G08520.1     KIAADVPGKSVEQIKEHYELLVEDVTRIESGCVPLPAY----GSPEGSNGHAGDEGASSK
Os019520_Os04t0 KLAEAVEGKTADEVRRHYELLVEDVDGIEAGRVPLLVYAGDGGVEEGSAGGGKKGGGGGG
Os019521_Os04t0 KLAEAVEGKTADEVRRHYELLVEDVDGIEAGRVPLLVYAGDGGVEEGSAGGGKKGGGGGG
                *:*  * **:.::::.*********  **:* *** .*    *  *** * . . *... 

AT5G08520.1     KGGNSHAGESNQAGKSKSDQERRKGIAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRT
Os019520_Os04t0 GGGGGGHGEKGSA--KSSEQERRKGIAWTEDEHRLFLLGLEKYGKGDWRSISRNFVISRT
Os019521_Os04t0 GGGGGGHGEKGSA--KSSEQERRKGIAWTEDEHRLFLLGLEKYGKGDWRSISRNFVISRT
                 **..  **...*  ..*:*********************:***************::**

AT5G08520.1     PTQVASHAQKYFIRLNSMNKDRRRSSIHDITSVGNADVSTPQGPITGQNNSNNNNNNNNN
Os019520_Os04t0 PTQVASHAQKYFIRLNSMNRERRRSSIHDITSVNNGDTSAAQGPITGQPNGPSAN-----
Os019521_Os04t0 PTQVASHAQKYFIRLNSMNRERRRSSIHDITSVNNGDTSAAQGPITGQPNGPSAN-----
                *******************::************.*.*.*:.******* *. . *     

AT5G08520.1     NSSPAVAGGGNKSAKQAV--SQAPPGPPMYGTPAIGQP-------AVGTPVNLPAP--PH
Os019520_Os04t0 ---PG------KSSKQSLQPANAPPGVDAYGT-TIGQPVGGPLVSAVGTPVTLPVPAAPH
Os019521_Os04t0 ---PG------KSSKQSLQPANAPPGVDAYGT-TIGQPVGGPLVSAVGTPVTLPVPAAPH
                   *.      **:**::  ::****   *** :****       ******.**.*  **

AT5G08520.1     MAYGVHAAPVPGSVVPGAAMNIGQMPYTMPRTPTAHR
Os019520_Os04t0 IAYGMH-APVPGAVVPGAPVNMPPMPYPMP-PPTSHG
Os019521_Os04t0 IAYGMH-APVPGAVVPGAPVNMPPMPYPMP-PPTSHG
                :***:* *****:*****.:*:  ***.** .**:*
BoxShade v3.31 C (beta, 970507) Output
AT5G08520.1     M T V E E V S D - - - - - - - - - - - - - - - - - - - - - G S V W S R E D D I A F E R A L A N N T D E S E E - - - R W E
Os019520_Os04t0    M A V E E A S S S S G G G R G G G G G G G G E E G L S G C G G G W T R E R E K A F E N A L A T V G D D E E E G D G L W E
Os019521_Os04t0    M A V E E A S S S S G G G R G G G G G G G G E E G L S G C G G G W T R E R E K A F E N A L A T V G D D E E E G D G L W E
 
AT5G08520.1     K I A A D V P G K S V E Q I K E H Y E L L V E D V T R I E S G C V P L P A Y - - - - G S P E G S N G H A G D E G A S S K
Os019520_Os04t0    K L A E A V E G K T A D E V R R H Y E L L V E D V D G I E A G R V P L L V Y A G D G G V E E G S A G G G K K G G G G G G
Os019521_Os04t0    K L A E A V E G K T A D E V R R H Y E L L V E D V D G I E A G R V P L L V Y A G D G G V E E G S A G G G K K G G G G G G
 
AT5G08520.1     K G G N S H A G E S N Q A G K S K S D Q E R R K G I A W T E D E H R L F L L G L D K Y G K G D W R S I S R N F V V T R T
Os019520_Os04t0    G G G G G G H G E K G S A - - K S S E Q E R R K G I A W T E D E H R L F L L G L E K Y G K G D W R S I S R N F V I S R T
Os019521_Os04t0    G G G G G G H G E K G S A - - K S S E Q E R R K G I A W T E D E H R L F L L G L E K Y G K G D W R S I S R N F V I S R T
 
AT5G08520.1     P T Q V A S H A Q K Y F I R L N S M N K D R R R S S I H D I T S V G N A D V S T P Q G P I T G Q N N S N N N N N N N N N
Os019520_Os04t0    P T Q V A S H A Q K Y F I R L N S M N R E R R R S S I H D I T S V N N G D T S A A Q G P I T G Q P N G P S A N - - - - -
Os019521_Os04t0    P T Q V A S H A Q K Y F I R L N S M N R E R R R S S I H D I T S V N N G D T S A A Q G P I T G Q P N G P S A N - - - - -
 
AT5G08520.1     N S S P A V A G G G N K S A K Q A V - - S Q A P P G P P M Y G T P A I G Q P - - - - - - - A V G T P V N L P A P - - P H
Os019520_Os04t0    - - - P G - - - - - - K S S K Q S L Q P A N A P P G V D A Y G T - T I G Q P V G G P L V S A V G T P V T L P V P A A P H
Os019521_Os04t0    - - - P G - - - - - - K S S K Q S L Q P A N A P P G V D A Y G T - T I G Q P V G G P L V S A V G T P V T L P V P A A P H
 
AT5G08520.1     M A Y G V H A A P V P G S V V P G A A M N I G Q M P Y T M P R T P T A H R
Os019520_Os04t0    I A Y G M H - A P V P G A V V P G A P V N M P P M P Y P M P - P P T S H G
Os019521_Os04t0    I A Y G M H - A P V P G A V V P G A P V N M P P M P Y P M P - P P T S H G
 
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