fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G08520.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb030230 VTLSQGLQLKLVMHRS in 207/476 AT5G08520.1 1st_1st 0.546875 Ia
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G08520.1     -----------------------------------------------MTVEEVSDG----
Sb030230_Sorbi1 HSSYLAAPPPLHFRSPPKPRNPTRGIPRGRRLLRVHPPRGVSSGSASMAVEEASSSGGGG
                                                               *:***.*..    

AT5G08520.1     ----SVWSREDDIAFERALANNT---DESEERWEKIAADVPGKSVEQIKEHYELLVEDVT
Sb030230_Sorbi1 EEGCGAWTREQEKAFENAVATTMGGEEDGDARWEKLAEAVEGKTPEEVRRHYELLVEDVD
                    ..*:**:: ***.*:*..    ::.: ****:*  * **: *:::.********* 

AT5G08520.1     RIESGCVPLPAYGSPEGSNGHAGDEGASSKKGGNSHAGESNQAGKSKSDQERRKGIAWTE
Sb030230_Sorbi1 GIESGRVPLPTYAA-DGAAEEGGGGGGGGKKGGGGGGTHGDKGSAKSAEQERRKGIAWTE
                 **** ****:*.: :*:  ..*. *...****.. . ..::.. ..::***********

AT5G08520.1     DEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRSSIHDI
Sb030230_Sorbi1 DEHRLFLLGLEKYGKGDWRSISRNFVISRTPTQVASHAQKYFIRLNSMNRERRRSSIHDI
                **********:***************::*********************::*********

AT5G08520.1     TSVGNADVSTPQGPITGQNNSNNNNNNNNNNSSPAVAGGGNKSAKQAVSQAPPGPPMYGT
Sb030230_Sorbi1 TSVNNGDASTAQGPITGQTNGQAANPGKPSKQSPQPA------------NTPPGVDAYGT
                ***.*.*.**.*******.*.:  * .: .:.**  *            ::***   ***

AT5G08520.1     PAIGQP-------AVGTPVNLP--APPHMAYGVHAAPVPGSVVPGAAMNIGQMPYTMPRT
Sb030230_Sorbi1 -TIGQPVGGPLVSAVGTPVTLPVSAPPHLAYGMH-APVPGAVVPGAPVNIAPMPYPMP-P
                 :****       ******.**  ****:***:* *****:*****.:**. ***.** .

AT5G08520.1     PTAHR
Sb030230_Sorbi1 PSSHG
                *::*
BoxShade v3.31 C (beta, 970507) Output
AT5G08520.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M T V E E V S D G - - - -
Sb030230_Sorbi1    H S S Y L A A P P P L H F R S P P K P R N P T R G I P R G R R L L R V H P P R G V S S G S A S M A V E E A S S S G G G G
 
AT5G08520.1     - - - - S V W S R E D D I A F E R A L A N N T - - - D E S E E R W E K I A A D V P G K S V E Q I K E H Y E L L V E D V T
Sb030230_Sorbi1    E E G C G A W T R E Q E K A F E N A V A T T M G G E E D G D A R W E K L A E A V E G K T P E E V R R H Y E L L V E D V D
 
AT5G08520.1     R I E S G C V P L P A Y G S P E G S N G H A G D E G A S S K K G G N S H A G E S N Q A G K S K S D Q E R R K G I A W T E
Sb030230_Sorbi1    G I E S G R V P L P T Y A A - D G A A E E G G G G G G G G K K G G G G G G T H G D K G S A K S A E Q E R R K G I A W T E
 
AT5G08520.1     D E H R L F L L G L D K Y G K G D W R S I S R N F V V T R T P T Q V A S H A Q K Y F I R L N S M N K D R R R S S I H D I
Sb030230_Sorbi1    D E H R L F L L G L E K Y G K G D W R S I S R N F V I S R T P T Q V A S H A Q K Y F I R L N S M N R E R R R S S I H D I
 
AT5G08520.1     T S V G N A D V S T P Q G P I T G Q N N S N N N N N N N N N N S S P A V A G G G N K S A K Q A V S Q A P P G P P M Y G T
Sb030230_Sorbi1    T S V N N G D A S T A Q G P I T G Q T N G Q A A N P G K P S K Q S P Q P A - - - - - - - - - - - - N T P P G V D A Y G T
 
AT5G08520.1     P A I G Q P - - - - - - - A V G T P V N L P - - A P P H M A Y G V H A A P V P G S V V P G A A M N I G Q M P Y T M P R T
Sb030230_Sorbi1    - T I G Q P V G G P L V S A V G T P V T L P V S A P P H L A Y G M H - A P V P G A V V P G A P V N I A P M P Y P M P - P
 
AT5G08520.1     P T A H R
Sb030230_Sorbi1    P S S H G
 
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