Input
| Putative repression domain
|
|
AT5G08520.1 |
not found |
|
Ortholog
| Putative repression domain
| Reverse top hit
| Relation
| Blast score ratio
| Type
|
Sb030230 |
VTLSQGLQLKLVMHRS in 207/476 |
AT5G08520.1 |
1st_1st |
0.546875 |
Ia |
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.
CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)
AT5G08520.1 -----------------------------------------------MTVEEVSDG----
Sb030230_Sorbi1 HSSYLAAPPPLHFRSPPKPRNPTRGIPRGRRLLRVHPPRGVSSGSASMAVEEASSSGGGG
*:***.*..
AT5G08520.1 ----SVWSREDDIAFERALANNT---DESEERWEKIAADVPGKSVEQIKEHYELLVEDVT
Sb030230_Sorbi1 EEGCGAWTREQEKAFENAVATTMGGEEDGDARWEKLAEAVEGKTPEEVRRHYELLVEDVD
..*:**:: ***.*:*.. ::.: ****:* * **: *:::.*********
AT5G08520.1 RIESGCVPLPAYGSPEGSNGHAGDEGASSKKGGNSHAGESNQAGKSKSDQERRKGIAWTE
Sb030230_Sorbi1 GIESGRVPLPTYAA-DGAAEEGGGGGGGGKKGGGGGGTHGDKGSAKSAEQERRKGIAWTE
**** ****:*.: :*: ..*. *...****.. . ..::.. ..::***********
AT5G08520.1 DEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRSSIHDI
Sb030230_Sorbi1 DEHRLFLLGLEKYGKGDWRSISRNFVISRTPTQVASHAQKYFIRLNSMNRERRRSSIHDI
**********:***************::*********************::*********
AT5G08520.1 TSVGNADVSTPQGPITGQNNSNNNNNNNNNNSSPAVAGGGNKSAKQAVSQAPPGPPMYGT
Sb030230_Sorbi1 TSVNNGDASTAQGPITGQTNGQAANPGKPSKQSPQPA------------NTPPGVDAYGT
***.*.*.**.*******.*.: * .: .:.** * ::*** ***
AT5G08520.1 PAIGQP-------AVGTPVNLP--APPHMAYGVHAAPVPGSVVPGAAMNIGQMPYTMPRT
Sb030230_Sorbi1 -TIGQPVGGPLVSAVGTPVTLPVSAPPHLAYGMH-APVPGAVVPGAPVNIAPMPYPMP-P
:**** ******.** ****:***:* *****:*****.:**. ***.** .
AT5G08520.1 PTAHR
Sb030230_Sorbi1 PSSHG
*::*
BoxShade v3.31 C (beta, 970507) Output
AT5G08520.1 |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
M |
T |
V |
E |
E |
V |
S |
D |
G |
- |
- |
- |
- |
Sb030230_Sorbi1 |
H |
S |
S |
Y |
L |
A |
A |
P |
P |
P |
L |
H |
F |
R |
S |
P |
P |
K |
P |
R |
N |
P |
T |
R |
G |
I |
P |
R |
G |
R |
R |
L |
L |
R |
V |
H |
P |
P |
R |
G |
V |
S |
S |
G |
S |
A |
S |
M |
A |
V |
E |
E |
A |
S |
S |
S |
G |
G |
G |
G |
|
AT5G08520.1 |
- |
- |
- |
- |
S |
V |
W |
S |
R |
E |
D |
D |
I |
A |
F |
E |
R |
A |
L |
A |
N |
N |
T |
- |
- |
- |
D |
E |
S |
E |
E |
R |
W |
E |
K |
I |
A |
A |
D |
V |
P |
G |
K |
S |
V |
E |
Q |
I |
K |
E |
H |
Y |
E |
L |
L |
V |
E |
D |
V |
T |
Sb030230_Sorbi1 |
E |
E |
G |
C |
G |
A |
W |
T |
R |
E |
Q |
E |
K |
A |
F |
E |
N |
A |
V |
A |
T |
T |
M |
G |
G |
E |
E |
D |
G |
D |
A |
R |
W |
E |
K |
L |
A |
E |
A |
V |
E |
G |
K |
T |
P |
E |
E |
V |
R |
R |
H |
Y |
E |
L |
L |
V |
E |
D |
V |
D |
|
AT5G08520.1 |
R |
I |
E |
S |
G |
C |
V |
P |
L |
P |
A |
Y |
G |
S |
P |
E |
G |
S |
N |
G |
H |
A |
G |
D |
E |
G |
A |
S |
S |
K |
K |
G |
G |
N |
S |
H |
A |
G |
E |
S |
N |
Q |
A |
G |
K |
S |
K |
S |
D |
Q |
E |
R |
R |
K |
G |
I |
A |
W |
T |
E |
Sb030230_Sorbi1 |
G |
I |
E |
S |
G |
R |
V |
P |
L |
P |
T |
Y |
A |
A |
- |
D |
G |
A |
A |
E |
E |
G |
G |
G |
G |
G |
G |
G |
G |
K |
K |
G |
G |
G |
G |
G |
G |
T |
H |
G |
D |
K |
G |
S |
A |
K |
S |
A |
E |
Q |
E |
R |
R |
K |
G |
I |
A |
W |
T |
E |
|
AT5G08520.1 |
D |
E |
H |
R |
L |
F |
L |
L |
G |
L |
D |
K |
Y |
G |
K |
G |
D |
W |
R |
S |
I |
S |
R |
N |
F |
V |
V |
T |
R |
T |
P |
T |
Q |
V |
A |
S |
H |
A |
Q |
K |
Y |
F |
I |
R |
L |
N |
S |
M |
N |
K |
D |
R |
R |
R |
S |
S |
I |
H |
D |
I |
Sb030230_Sorbi1 |
D |
E |
H |
R |
L |
F |
L |
L |
G |
L |
E |
K |
Y |
G |
K |
G |
D |
W |
R |
S |
I |
S |
R |
N |
F |
V |
I |
S |
R |
T |
P |
T |
Q |
V |
A |
S |
H |
A |
Q |
K |
Y |
F |
I |
R |
L |
N |
S |
M |
N |
R |
E |
R |
R |
R |
S |
S |
I |
H |
D |
I |
|
AT5G08520.1 |
T |
S |
V |
G |
N |
A |
D |
V |
S |
T |
P |
Q |
G |
P |
I |
T |
G |
Q |
N |
N |
S |
N |
N |
N |
N |
N |
N |
N |
N |
N |
N |
S |
S |
P |
A |
V |
A |
G |
G |
G |
N |
K |
S |
A |
K |
Q |
A |
V |
S |
Q |
A |
P |
P |
G |
P |
P |
M |
Y |
G |
T |
Sb030230_Sorbi1 |
T |
S |
V |
N |
N |
G |
D |
A |
S |
T |
A |
Q |
G |
P |
I |
T |
G |
Q |
T |
N |
G |
Q |
A |
A |
N |
P |
G |
K |
P |
S |
K |
Q |
S |
P |
Q |
P |
A |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
N |
T |
P |
P |
G |
V |
D |
A |
Y |
G |
T |
|
AT5G08520.1 |
P |
A |
I |
G |
Q |
P |
- |
- |
- |
- |
- |
- |
- |
A |
V |
G |
T |
P |
V |
N |
L |
P |
- |
- |
A |
P |
P |
H |
M |
A |
Y |
G |
V |
H |
A |
A |
P |
V |
P |
G |
S |
V |
V |
P |
G |
A |
A |
M |
N |
I |
G |
Q |
M |
P |
Y |
T |
M |
P |
R |
T |
Sb030230_Sorbi1 |
- |
T |
I |
G |
Q |
P |
V |
G |
G |
P |
L |
V |
S |
A |
V |
G |
T |
P |
V |
T |
L |
P |
V |
S |
A |
P |
P |
H |
L |
A |
Y |
G |
M |
H |
- |
A |
P |
V |
P |
G |
A |
V |
V |
P |
G |
A |
P |
V |
N |
I |
A |
P |
M |
P |
Y |
P |
M |
P |
- |
P |
|
AT5G08520.1 |
P |
T |
A |
H |
R |
Sb030230_Sorbi1 |
P |
S |
S |
H |
G |
|
|