fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G08520.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm046848 not found in 302aa AT1G49010.1 not_not 0.456597222 III
Gm011625 not found in 307aa AT1G49010.1 not_not 0.453125 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G08520.1     MTVEEVSDGSVWSREDDIAFERALANN--TDESEERWEKIAADVPGKSVEQIKEHYELLV
gm046848_Glyma1 MS----SSGTIWSYEEEKAFENAIAMHWIEESSKEQWEKIASAVPSKSMEDVKQHYQVLV
gm011625_Glyma0 MS----SSGTIWSYDEEKAFENAIAMHWIEESSKEQWEKIASAVPSKSMEEVKQHYQVLV
                *:    *.*::** ::: ***.*:* :   :.*:*:*****: **.**:*::*:**::**

AT5G08520.1     EDVTRIESGCVPLPAY-GSPEGSNG----HAGDEGASSKKGGNSHAGE------------
gm046848_Glyma1 EDVSAIEAGHISFPNYAASEEITSSNKDFHGSSKATSSDKRSNCNYGRGFSGLGHDSTTH
gm011625_Glyma0 EDVSAIEAGHISFPNY-ASDETTSSNKDFHGSSKATSSDKRSNCNYGSGFSGLGLDSTTH
                ***: **:* :.:* * .* * :..    *...:.:**.* .*.: *             

AT5G08520.1     -SNQAGKSK-SDQERRKGIAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASH
gm046848_Glyma1 SSGKGGLSRSSEQERRKGIPWTEEEHRLFLLGLEKFGKGDWRSISRNFVISRTPTQVASH
gm011625_Glyma0 SSGKGGLSRSSEQERRKGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVISRTPTQVASH
                 *.:.* *: *:*******.***:*********:*:*************::*********

AT5G08520.1     AQKYFIRLNSMNKDRRRSSIHDITSVGNADVSTPQGPITGQNNSNNNNNNNNNNSSPAVA
gm046848_Glyma1 AQKYFIRLNSMNRDRRRSSIHDITSVNNGDVANNQAPITGQHSSTIPSNT---------M
gm011625_Glyma0 AQKYFIRLNSMNRDRRRSSIHDITSVNNGDVASSQAPITGLHSSTISSNT---------M
                ************:*************.*.**:. *.**** :.*.  .*.          

AT5G08520.1     GGGNKSAKQAVSQAPPGPPMYGTPAIGQP----------AVGTPVNLPAPPHMAYGV--H
gm046848_Glyma1 GVGQSLKHRVQGHIPPGLGMYGTP-VGHPVAAPPGHMASAVGTPVMLPPGPHP------H
gm011625_Glyma0 GVGQSLKHRVQGHIPPGLGMYGTP-VGHPVAAPPGHMASAVGTPVMLPPGPHPHPHPHHH
                * *:.  ::. .: ***  ***** :*:*          ****** **. **       *

AT5G08520.1     AAPVPGSVVPGAAMNIGQMPYTMPRTPTAHR
gm046848_Glyma1 AHPHPPYVLP--------LAYPMA-PPTMHQ
gm011625_Glyma0 AHPHPPYVLP--------LAYPMA-PPTMHQ
                * * *  *:*        :.*.*. .** *:
BoxShade v3.31 C (beta, 970507) Output
AT5G08520.1     M T V E E V S D G S V W S R E D D I A F E R A L A N N - - T D E S E E R W E K I A A D V P G K S V E Q I K E H Y E L L V
gm046848_Glyma1    M S - - - - S S G T I W S Y E E E K A F E N A I A M H W I E E S S K E Q W E K I A S A V P S K S M E D V K Q H Y Q V L V
gm011625_Glyma0    M S - - - - S S G T I W S Y D E E K A F E N A I A M H W I E E S S K E Q W E K I A S A V P S K S M E E V K Q H Y Q V L V
 
AT5G08520.1     E D V T R I E S G C V P L P A Y - G S P E G S N G - - - - H A G D E G A S S K K G G N S H A G E - - - - - - - - - - - -
gm046848_Glyma1    E D V S A I E A G H I S F P N Y A A S E E I T S S N K D F H G S S K A T S S D K R S N C N Y G R G F S G L G H D S T T H
gm011625_Glyma0    E D V S A I E A G H I S F P N Y - A S D E T T S S N K D F H G S S K A T S S D K R S N C N Y G S G F S G L G L D S T T H
 
AT5G08520.1     - S N Q A G K S K - S D Q E R R K G I A W T E D E H R L F L L G L D K Y G K G D W R S I S R N F V V T R T P T Q V A S H
gm046848_Glyma1    S S G K G G L S R S S E Q E R R K G I P W T E E E H R L F L L G L E K F G K G D W R S I S R N F V I S R T P T Q V A S H
gm011625_Glyma0    S S G K G G L S R S S E Q E R R K G I P W T E E E H R L F L L G L D K F G K G D W R S I S R N F V I S R T P T Q V A S H
 
AT5G08520.1     A Q K Y F I R L N S M N K D R R R S S I H D I T S V G N A D V S T P Q G P I T G Q N N S N N N N N N N N N N S S P A V A
gm046848_Glyma1    A Q K Y F I R L N S M N R D R R R S S I H D I T S V N N G D V A N N Q A P I T G Q H S S T I P S N T - - - - - - - - - M
gm011625_Glyma0    A Q K Y F I R L N S M N R D R R R S S I H D I T S V N N G D V A S S Q A P I T G L H S S T I S S N T - - - - - - - - - M
 
AT5G08520.1     G G G N K S A K Q A V S Q A P P G P P M Y G T P A I G Q P - - - - - - - - - - A V G T P V N L P A P P H M A Y G V - - H
gm046848_Glyma1    G V G Q S L K H R V Q G H I P P G L G M Y G T P - V G H P V A A P P G H M A S A V G T P V M L P P G P H P - - - - - - H
gm011625_Glyma0    G V G Q S L K H R V Q G H I P P G L G M Y G T P - V G H P V A A P P G H M A S A V G T P V M L P P G P H P H P H P H H H
 
AT5G08520.1     A A P V P G S V V P G A A M N I G Q M P Y T M P R T P T A H R
gm046848_Glyma1    A H P H P P Y V L P - - - - - - - - L A Y P M A - P P T M H Q
gm011625_Glyma0    A H P H P P Y V L P - - - - - - - - L A Y P M A - P P T M H Q
 
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