fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G08790.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pp020005 not found in 434aa AT4G27410.2 1st_not 0.426056338 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G08790.1     ---MKS-------ELNLPAGFRFHPTDEELVKFYLCRKCASEQISAPVIAEIDLYKFNPW
pp020005_Pp1s5_ MVIMSSPSGGPVAQLQLPPGFRFHPTDEELVLHYLCRKAESKVFAIPVIAEIDLYKFDPW
                   *.*       :*:**.************ .*****. *: :: ***********:**

AT5G08790.1     ELPEMSLYGEKEWYFFSPRDRKYPNGSRPNRAAGTGYWKATGADKPI----GKPKTLGIK
pp020005_Pp1s5_ DLPGKAIFGEREWYFFSPRDRKYPNGARPNRAAASGYWKATGTDKPIHTAVGGIRKIGVK
                :**  :::**:***************:******.:*******:****    *  :.:*:*

AT5G08790.1     KALVFYAGKAPKGIKTNWIMHEYRLAN-VDRSASVNKKNNLRLDDWVLCRIYNKKGTMEK
pp020005_Pp1s5_ KALVFYEGRAPKGVKTNWIMHEYRLAEGVCASVHAHRKGSLRLDDWVLCRIYKKSTNAQR
                ****** *:****:************: *  *. .::*..************:*. . ::

AT5G08790.1     YFPADEKPRTTTMAEQSSSPFDTSD-----------STYPTLQED---DSSSSGGHGHV-
pp020005_Pp1s5_ --TGKERDSSSCVEEVLASLPEIDDPKLVLPRLGSFTGFPEPEDNHFMDSLLLGENKSVD
                  ...*:  :: : *  :*  : .*           : :*  :::   **   * :  * 

AT5G08790.1     --VSPD----VLEVQS--EPKWGEL-EDALEAFDTSM-FG--------------------
pp020005_Pp1s5_ AESSPEFKRSVLGLQRGMQPQPGTLGSHILSAFNSKFPFGWKMPRPVDGPFDSQQFDKFN
                   **:    ** :*   :*: * * .. *.**::.: **                    

AT5G08790.1     --------------SSMELLQP----------DAFVP-----------------------
pp020005_Pp1s5_ RQLLELGPTSSQRPTTLSLRQPAPDSAMRQVENVLMPLRPGTGAIPENRTISDEEVQSTS
                              :::.* **          :.::*                       

AT5G08790.1     ------QFLYQSD------YFT-SFQDP----------PEQKPFL---------------
pp020005_Pp1s5_ RASSMGQFSGTSNNEGLESIFTFNYEQPRSTINAMLPAPTTGPNTELRFSGSGMSASQPQ
                      **   *:       ** .:::*          *   *                 

AT5G08790.1     -------NWSFAPQG-
pp020005_Pp1s5_ YTQSRAPNYSYNPSSA
                       *:*: *..
BoxShade v3.31 C (beta, 970507) Output
AT5G08790.1     - - - M K S - - - - - - - E L N L P A G F R F H P T D E E L V K F Y L C R K C A S E Q I S A P V I A E I D L Y K F N P W
pp020005_Pp1s5_    M V I M S S P S G G P V A Q L Q L P P G F R F H P T D E E L V L H Y L C R K A E S K V F A I P V I A E I D L Y K F D P W
 
AT5G08790.1     E L P E M S L Y G E K E W Y F F S P R D R K Y P N G S R P N R A A G T G Y W K A T G A D K P I - - - - G K P K T L G I K
pp020005_Pp1s5_    D L P G K A I F G E R E W Y F F S P R D R K Y P N G A R P N R A A A S G Y W K A T G T D K P I H T A V G G I R K I G V K
 
AT5G08790.1     K A L V F Y A G K A P K G I K T N W I M H E Y R L A N - V D R S A S V N K K N N L R L D D W V L C R I Y N K K G T M E K
pp020005_Pp1s5_    K A L V F Y E G R A P K G V K T N W I M H E Y R L A E G V C A S V H A H R K G S L R L D D W V L C R I Y K K S T N A Q R
 
AT5G08790.1     Y F P A D E K P R T T T M A E Q S S S P F D T S D - - - - - - - - - - - S T Y P T L Q E D - - - D S S S S G G H G H V -
pp020005_Pp1s5_    - - T G K E R D S S S C V E E V L A S L P E I D D P K L V L P R L G S F T G F P E P E D N H F M D S L L L G E N K S V D
 
AT5G08790.1     - - V S P D - - - - V L E V Q S - - E P K W G E L - E D A L E A F D T S M - F G - - - - - - - - - - - - - - - - - - - -
pp020005_Pp1s5_    A E S S P E F K R S V L G L Q R G M Q P Q P G T L G S H I L S A F N S K F P F G W K M P R P V D G P F D S Q Q F D K F N
 
AT5G08790.1     - - - - - - - - - - - - - - S S M E L L Q P - - - - - - - - - - D A F V P - - - - - - - - - - - - - - - - - - - - - - -
pp020005_Pp1s5_    R Q L L E L G P T S S Q R P T T L S L R Q P A P D S A M R Q V E N V L M P L R P G T G A I P E N R T I S D E E V Q S T S
 
AT5G08790.1     - - - - - - Q F L Y Q S D - - - - - - Y F T - S F Q D P - - - - - - - - - - P E Q K P F L - - - - - - - - - - - - - - -
pp020005_Pp1s5_    R A S S M G Q F S G T S N N E G L E S I F T F N Y E Q P R S T I N A M L P A P T T G P N T E L R F S G S G M S A S Q P Q
 
AT5G08790.1     - - - - - - - N W S F A P Q G -
pp020005_Pp1s5_    Y T Q S R A P N Y S Y N P S S A
 
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