fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G08790.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt037481 not found in 304aa AT1G01720.1 1st_not 0.568661971 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G08790.1     MK-----SELNLPAGFRFHPTDEELVKFYLCRKCASEQISAPVIAEIDLYKFNPWELPEM
pt037481_POPTR_ MKGNRSADQLELPAGFRFHPTDDELVNHYLLKKCGGQSISAPIIAEIDLYKYDPWQLPEM
                **     .:*:***********:***:.** :**..:.****:********::**:****

AT5G08790.1     SLYGEKEWYFFSPRDRKYPNGSRPNRAAGTGYWKATGADKPIGKPKTLGIKKALVFYAGK
pt037481_POPTR_ ALYGEKEWYFFSPRDRKYPNGSRPNRAAGTGYWKATGADKPIGRPKPLGIKKALVFYAGK
                :******************************************:**.*************

AT5G08790.1     APKGIKTNWIMHEYRLANVDRSASVNKKNNLRLDDWVLCRIYNKKGTMEKYFPA------
pt037481_POPTR_ APKGIKTNWIMHEYRLANVDRTAG--KKNNLRLDDWVLCRIYNKKGSVEKHFPAERKSIA
                *********************:*.  ********************::**:***      

AT5G08790.1     ------DEKPRTTTMA------EQSSSP------------FDTSDSTYPTLQEDDSSSSG
pt037481_POPTR_ KYPEMEEQKPNISEMSGYHNGMSQIAAPTMMMSNSNDFLYMDTSDSI-PRLNTDSSSSE-
                      ::**. : *:      .* ::*            :*****  * *: *.***. 

AT5G08790.1     GHGHVVSPDVL---EVQSEPKWGELEDALEAFDTSMFGSSMELLQPDAFVPQFLYQSDYF
pt037481_POPTR_ ---HVLSPEVTCEKEVQSQPKWNDQLD--NAFDFN-FNYIDDGFQDYPFASQDQFQLDQL
                   **:**:*    ****:***.:  *  :*** . *.   : :*  .*..*  :* * :

AT5G08790.1     TSFQDPPE--QKPFLNWSFAPQG
pt037481_POPTR_ SPLQDMFMYLQKPF---------
                :.:**     ****
BoxShade v3.31 C (beta, 970507) Output
AT5G08790.1     M K - - - - - S E L N L P A G F R F H P T D E E L V K F Y L C R K C A S E Q I S A P V I A E I D L Y K F N P W E L P E M
pt037481_POPTR_    M K G N R S A D Q L E L P A G F R F H P T D D E L V N H Y L L K K C G G Q S I S A P I I A E I D L Y K Y D P W Q L P E M
 
AT5G08790.1     S L Y G E K E W Y F F S P R D R K Y P N G S R P N R A A G T G Y W K A T G A D K P I G K P K T L G I K K A L V F Y A G K
pt037481_POPTR_    A L Y G E K E W Y F F S P R D R K Y P N G S R P N R A A G T G Y W K A T G A D K P I G R P K P L G I K K A L V F Y A G K
 
AT5G08790.1     A P K G I K T N W I M H E Y R L A N V D R S A S V N K K N N L R L D D W V L C R I Y N K K G T M E K Y F P A - - - - - -
pt037481_POPTR_    A P K G I K T N W I M H E Y R L A N V D R T A G - - K K N N L R L D D W V L C R I Y N K K G S V E K H F P A E R K S I A
 
AT5G08790.1     - - - - - - D E K P R T T T M A - - - - - - E Q S S S P - - - - - - - - - - - - F D T S D S T Y P T L Q E D D S S S S G
pt037481_POPTR_    K Y P E M E E Q K P N I S E M S G Y H N G M S Q I A A P T M M M S N S N D F L Y M D T S D S I - P R L N T D S S S S E -
 
AT5G08790.1     G H G H V V S P D V L - - - E V Q S E P K W G E L E D A L E A F D T S M F G S S M E L L Q P D A F V P Q F L Y Q S D Y F
pt037481_POPTR_    - - - H V L S P E V T C E K E V Q S Q P K W N D Q L D - - N A F D F N - F N Y I D D G F Q D Y P F A S Q D Q F Q L D Q L
 
AT5G08790.1     T S F Q D P P E - - Q K P F L N W S F A P Q G
pt037481_POPTR_    S P L Q D M F M Y L Q K P F - - - - - - - - -
 
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