fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G08790.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm012970 not found in 298aa AT1G01720.1 1st_not 0.575704225 II
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G08790.1     MKSELNLPAGFRFHPTDEELVKFYLCRKCASEQISAPVIAEIDLYKFNPWELPEMSLYGE
gm012970_Glyma0 MPGELQLPPGFRFHPTDDELVNHYLCRKCAAQTIAVPIIKEIDLYKFDPWQLPEMALYGE
                * .**:**.********:***:.*******:: *:.*:* *******:**:****:****

AT5G08790.1     KEWYFFSPRDRKYPNGSRPNRAAGTGYWKATGADKPIGKPKTLGIKKALVFYAGKAPKGI
gm012970_Glyma0 KEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPIGKPKALGIKKALVFYAGKAPKGV
                ************************:****************:*****************:

AT5G08790.1     KTNWIMHEYRLANVDRSASVNKK----NNLRLDDWVLCRIYNKKGTMEKY----------
gm012970_Glyma0 KTNWIMHEYRLANVDRSAS--KKNTTTNNLRLDDWVLCRIYNKKGKIEKYNGVAVVDQKV
                *******************  **    ******************.:***          

AT5G08790.1     ---------FPADEKPRTTTMAEQSSSP----FDTSDSTYPTLQEDDSSSSGGHGHVVSP
gm012970_Glyma0 AKLSEEEVQFQHETKPQIKMYGHDDFRNDQLYMDTSDSG-PRLHTDSSCSE----HVVSP
                         *  : **: .  ..:.       :*****  * *: *.*.*.    *****

AT5G08790.1     DVL---EVQSEPKWGELE---DALEAFDTSMFGSSMELLQPDAFVPQFLYQSDYFTSFQD
gm012970_Glyma0 DGTCEKEVQSEPKWNDLELGPDPALGFDFNF----MDLTSDDAFAPQVQYQINHLSPWQ-
                *     ********.:**   *.  .** .:    *:* . ***.**. ** ::::.:* 

AT5G08790.1     PPEQKPFLNWSFAPQG
gm012970_Glyma0 --EMFTYLPKTF----
                  *  .:*  :*
BoxShade v3.31 C (beta, 970507) Output
AT5G08790.1     M K S E L N L P A G F R F H P T D E E L V K F Y L C R K C A S E Q I S A P V I A E I D L Y K F N P W E L P E M S L Y G E
gm012970_Glyma0    M P G E L Q L P P G F R F H P T D D E L V N H Y L C R K C A A Q T I A V P I I K E I D L Y K F D P W Q L P E M A L Y G E
 
AT5G08790.1     K E W Y F F S P R D R K Y P N G S R P N R A A G T G Y W K A T G A D K P I G K P K T L G I K K A L V F Y A G K A P K G I
gm012970_Glyma0    K E W Y F F S P R D R K Y P N G S R P N R A A G S G Y W K A T G A D K P I G K P K A L G I K K A L V F Y A G K A P K G V
 
AT5G08790.1     K T N W I M H E Y R L A N V D R S A S V N K K - - - - N N L R L D D W V L C R I Y N K K G T M E K Y - - - - - - - - - -
gm012970_Glyma0    K T N W I M H E Y R L A N V D R S A S - - K K N T T T N N L R L D D W V L C R I Y N K K G K I E K Y N G V A V V D Q K V
 
AT5G08790.1     - - - - - - - - - F P A D E K P R T T T M A E Q S S S P - - - - F D T S D S T Y P T L Q E D D S S S S G G H G H V V S P
gm012970_Glyma0    A K L S E E E V Q F Q H E T K P Q I K M Y G H D D F R N D Q L Y M D T S D S G - P R L H T D S S C S E - - - - H V V S P
 
AT5G08790.1     D V L - - - E V Q S E P K W G E L E - - - D A L E A F D T S M F G S S M E L L Q P D A F V P Q F L Y Q S D Y F T S F Q D
gm012970_Glyma0    D G T C E K E V Q S E P K W N D L E L G P D P A L G F D F N F - - - - M D L T S D D A F A P Q V Q Y Q I N H L S P W Q -
 
AT5G08790.1     P P E Q K P F L N W S F A P Q G
gm012970_Glyma0    - - E M F T Y L P K T F - - - -
 
0