fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G09750.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt036009 not found in 132aa AT5G09750.1 not_1st 0.467680608 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G09750.1     MNNYNMNPSLFQNYTWNNIINSSNNNNKNDDHHHQHNNDPIGMAMDQYTQLHIFNPFSSS
pt036009_POPTR_ ------------------------------------------------------------
                                                                            

AT5G09750.1     HFPPLSSSLTTTTLLSGDQEDDEDEEEPLEELGAMKEMMYKIAAMQSVDIDPATVKKPKR
pt036009_POPTR_ ----------------------------------MKEMMYRVAAMQPVDIDPATIHKPKR
                                                  ******::****.*******::****

AT5G09750.1     RNVRISDDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRL
pt036009_POPTR_ KNVRISDDPQSVAARLRRERISEKIRILQRLVPGGRKMDTASMLDEAIRYVKFLKRQIRS
                :************** *******:*********** *********************** 

AT5G09750.1     LNNNTGYTP--------PPPQDQASQAVTTSWVSPPPPPSFGRGGRGVGELI
pt036009_POPTR_ LQPNHQHQPCNTNGDWQVPYNDKPLNSITTTTSSSLEP----RAARLHSW--
                *: *  : *         * :*:. :::**:  *.  *    *..*  .
BoxShade v3.31 C (beta, 970507) Output
AT5G09750.1     M N N Y N M N P S L F Q N Y T W N N I I N S S N N N N K N D D H H H Q H N N D P I G M A M D Q Y T Q L H I F N P F S S S
pt036009_POPTR_    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT5G09750.1     H F P P L S S S L T T T T L L S G D Q E D D E D E E E P L E E L G A M K E M M Y K I A A M Q S V D I D P A T V K K P K R
pt036009_POPTR_    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M K E M M Y R V A A M Q P V D I D P A T I H K P K R
 
AT5G09750.1     R N V R I S D D P Q S V A A R H R R E R I S E R I R I L Q R L V P G G T K M D T A S M L D E A I R Y V K F L K R Q I R L
pt036009_POPTR_    K N V R I S D D P Q S V A A R L R R E R I S E K I R I L Q R L V P G G R K M D T A S M L D E A I R Y V K F L K R Q I R S
 
AT5G09750.1     L N N N T G Y T P - - - - - - - - P P P Q D Q A S Q A V T T S W V S P P P P P S F G R G G R G V G E L I
pt036009_POPTR_    L Q P N H Q H Q P C N T N G D W Q V P Y N D K P L N S I T T T T S S S L E P - - - - R A A R L H S W - -
 
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