fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G09750.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt002958 not found in 231aa AT5G09750.1 1st_1st 0.482889733 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G09750.1     MNNYNMNPSLFQNYTWNNIINSSNNNNKNDDHHHQHNNDPIGMAMDQYTQLHIFNPFSSS
pt002958_POPTR_ ---MDFNQAKF-NHTWN-----------------------LDMSMEDQILHHDQLPFNSI
                    ::* : * *:***                       :.*:*::    *   **.* 

AT5G09750.1     HFP-----------PLSSSLTTTTLLSGDQ---EDDEDEEEPLEELGAMKEMMYKIAAMQ
pt002958_POPTR_ -WPSCPLQTQQTQIPASSQTPISTFL-GDQICNNTEEEEDEPEEELGAMKEMMYRIAAMQ
                 :*           * **. . :*:* ***   : :*:*:** ***********:*****

AT5G09750.1     SVDIDPATVKKPKRRNVRISDDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDE
pt002958_POPTR_ PVEIDPATIRKPKRRNVRISDDPQSVAARLRRERISEKIRILQRLVPGGRKMDTASMLEE
                .*:*****::******************* *******:*********** ********:*

AT5G09750.1     AIRYVKFLKRQIRLLNNNTGYTPPPPQDQASQAVTTS--WVSP---------PPPPSF--
pt002958_POPTR_ AIRYVKFLKRQIRLLQ--------PNHHQQHQPCTTNGDWQIPYSNKPLDSITTTPSLLE
                ***************:        * :.*  *. **.  *  *         ...**:  

AT5G09750.1     GRGGRGVGELI------------------
pt002958_POPTR_ PRAG-GLGYILGGNTGGNPLCFNHEVISD
                 *.* *:* ::
BoxShade v3.31 C (beta, 970507) Output
AT5G09750.1     M N N Y N M N P S L F Q N Y T W N N I I N S S N N N N K N D D H H H Q H N N D P I G M A M D Q Y T Q L H I F N P F S S S
pt002958_POPTR_    - - - M D F N Q A K F - N H T W N - - - - - - - - - - - - - - - - - - - - - - - L D M S M E D Q I L H H D Q L P F N S I
 
AT5G09750.1     H F P - - - - - - - - - - - P L S S S L T T T T L L S G D Q - - - E D D E D E E E P L E E L G A M K E M M Y K I A A M Q
pt002958_POPTR_    - W P S C P L Q T Q Q T Q I P A S S Q T P I S T F L - G D Q I C N N T E E E E D E P E E E L G A M K E M M Y R I A A M Q
 
AT5G09750.1     S V D I D P A T V K K P K R R N V R I S D D P Q S V A A R H R R E R I S E R I R I L Q R L V P G G T K M D T A S M L D E
pt002958_POPTR_    P V E I D P A T I R K P K R R N V R I S D D P Q S V A A R L R R E R I S E K I R I L Q R L V P G G R K M D T A S M L E E
 
AT5G09750.1     A I R Y V K F L K R Q I R L L N N N T G Y T P P P P Q D Q A S Q A V T T S - - W V S P - - - - - - - - - P P P P S F - -
pt002958_POPTR_    A I R Y V K F L K R Q I R L L Q - - - - - - - - P N H H Q Q H Q P C T T N G D W Q I P Y S N K P L D S I T T T P S L L E
 
AT5G09750.1     G R G G R G V G E L I - - - - - - - - - - - - - - - - - -
pt002958_POPTR_    P R A G - G L G Y I L G G N T G G N P L C F N H E V I S D
 
0