fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G09750.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb014961 HHRLHHLGLDLDPASH in 95/348 AT5G09750.1 1st_1st 0.482889733 Ia
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G09750.1     MNNYNMNPSLFQNYTWNNIINSSNNNNKNDDHH---------------------------
Sb014961_Sorbi1 MDNITHNSSSSSSWDLDMSLGSHHHPLLFDSHHPNPGPPPPPPLPFHLSSSHPAHHHPPP
                *:* . *.*  ..:  :  :.* ::    *.**                           

AT5G09750.1     ---HQHNNDPIGMAMD---------------QYTQLH----IFNPFSSSH-------FPP
Sb014961_Sorbi1 HPAHHHHHHP---GLDPSPSSSLFPQPHHHHHHHRLHHLGLDLDPASHSHGHHRHHEF--
                   *:*::.*   .:*               :: :**     ::* * **       *  

AT5G09750.1     LSSSLTTTTLLSGDQED---------DEDEEEPL--------------------------
Sb014961_Sorbi1 ------------GEQQEPGGGGGGGGGEEHQEEMRQQQQHEAGGGGQEDRGGGGAAEDVE
                            *:*::         .*:.:* :                          

AT5G09750.1     EELGAMKEMMYKIAAMQSVDIDPATVKKPKRRNVRISDDPQSVAARHRRERISERIRILQ
Sb014961_Sorbi1 EELGAMKEMMYRIAAMQPVDIDPATIKKPRRRNVRISEDPQSVAARHRRERISERIRILQ
                ***********:*****.*******:***:*******:**********************

AT5G09750.1     RLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLNNNTGYTPPPPQDQ----ASQAVTTSWV
Sb014961_Sorbi1 RLVPGGTKMDTASMLDEAIRYIKFLKRQVQELQ----HQPSPTQQQYPASAGAGPSTSVV
                *********************:******:: *:    : *.*.*:*    *. . :** *

AT5G09750.1     SPPPPPSFGRGG-------RGVGELI----------------------------------
Sb014961_Sorbi1 GVAAP---GRPGGGPPFLPLGPGPLIDWAGLVRPVDIHGPTSSSSSSSMGGAHAALGFGF
                . ..*   ** *        * * **                                  

AT5G09750.1     ------------
Sb014961_Sorbi1 SSAGGQSSHGMH
BoxShade v3.31 C (beta, 970507) Output
AT5G09750.1     M N N Y N M N P S L F Q N Y T W N N I I N S S N N N N K N D D H H - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb014961_Sorbi1    M D N I T H N S S S S S S W D L D M S L G S H H H P L L F D S H H P N P G P P P P P P L P F H L S S S H P A H H H P P P
 
AT5G09750.1     - - - H Q H N N D P I G M A M D - - - - - - - - - - - - - - - Q Y T Q L H - - - - I F N P F S S S H - - - - - - - F P P
Sb014961_Sorbi1    H P A H H H H H H P - - - G L D P S P S S S L F P Q P H H H H H H H R L H H L G L D L D P A S H S H G H H R H H E F - -
 
AT5G09750.1     L S S S L T T T T L L S G D Q E D - - - - - - - - - D E D E E E P L - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb014961_Sorbi1    - - - - - - - - - - - - G E Q Q E P G G G G G G G G G E E H Q E E M R Q Q Q Q H E A G G G G Q E D R G G G G A A E D V E
 
AT5G09750.1     E E L G A M K E M M Y K I A A M Q S V D I D P A T V K K P K R R N V R I S D D P Q S V A A R H R R E R I S E R I R I L Q
Sb014961_Sorbi1    E E L G A M K E M M Y R I A A M Q P V D I D P A T I K K P R R R N V R I S E D P Q S V A A R H R R E R I S E R I R I L Q
 
AT5G09750.1     R L V P G G T K M D T A S M L D E A I R Y V K F L K R Q I R L L N N N T G Y T P P P P Q D Q - - - - A S Q A V T T S W V
Sb014961_Sorbi1    R L V P G G T K M D T A S M L D E A I R Y I K F L K R Q V Q E L Q - - - - H Q P S P T Q Q Q Y P A S A G A G P S T S V V
 
AT5G09750.1     S P P P P P S F G R G G - - - - - - - R G V G E L I - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb014961_Sorbi1    G V A A P - - - G R P G G G P P F L P L G P G P L I D W A G L V R P V D I H G P T S S S S S S S M G G A H A A L G F G F
 
AT5G09750.1     - - - - - - - - - - - -
Sb014961_Sorbi1    S S A G G Q S S H G M H
 
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