fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G09750.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb014961 HHRLHHLGLDLDPASH in 95/348 AT5G09750.1 1st_1st 0.482889733 Ia
Sb014962 HHRLHHLGLDLDPASH in 78/331 AT5G09750.1 not_1st 0.482889733 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G09750.1     MNNYNMN------------------PSLFQNYTWN-------------------------
Sb014962_Sorbi1 -----------------MSLGSHHHPLLFDSHHPNPGPPPPPPLPFHLSSSHPAHHHPPP
Sb014961_Sorbi1 MDNITHNSSSSSSWDLDMSLGSHHHPLLFDSHHPNPGPPPPPPLPFHLSSSHPAHHHPPP
                                         * **:.:  *                         

AT5G09750.1     ------------NIINSSNNNNKNDDHHHQHNNDPIGMAMDQYTQL---HIFNPFSSSHF
Sb014962_Sorbi1 HPAHHHHHHPGLDPSPSSSLFPQPHHHHHHHRLHHLGLDLDPASHSHGHHRHHEFGEQQE
Sb014961_Sorbi1 HPAHHHHHHPGLDPSPSSSLFPQPHHHHHHHRLHHLGLDLDPASHSHGHHRHHEFGEQQE
                            :   **.   : ..***:*. . :*: :*  ::    * .: *...: 

AT5G09750.1     PPLSSSLTTTTLLSGDQEDDEDE-----------------------EEPLEELGAMKEMM
Sb014962_Sorbi1 PGGGGG-------GGGGEEHQEEMRQQQQHEAGGGGQEDRGGGGAAEDVEEELGAMKEMM
Sb014961_Sorbi1 PGGGGG-------GGGGEEHQEEMRQQQQHEAGGGGQEDRGGGGAAEDVEEELGAMKEMM
                *  ...       .*. *:.::*                       *:  **********

AT5G09750.1     YKIAAMQSVDIDPATVKKPKRRNVRISDDPQSVAARHRRERISERIRILQRLVPGGTKMD
Sb014962_Sorbi1 YRIAAMQPVDIDPATIKKPRRRNVRISEDPQSVAARHRRERISERIRILQRLVPGGTKMD
Sb014961_Sorbi1 YRIAAMQPVDIDPATIKKPRRRNVRISEDPQSVAARHRRERISERIRILQRLVPGGTKMD
                *:*****.*******:***:*******:********************************

AT5G09750.1     TASMLDEAIRYVKFLKRQIRLLNNNTGYTPPPPQDQ----ASQAVTTSWVSPPPPPSFGR
Sb014962_Sorbi1 TASMLDEAIRYIKFLKRQVQELQ----HQPSPTQQQYPASAGAGPSTSVVGVAAP---GR
Sb014961_Sorbi1 TASMLDEAIRYIKFLKRQVQELQ----HQPSPTQQQYPASAGAGPSTSVVGVAAP---GR
                ***********:******:: *:    : *.*.*:*    *. . :** *. ..*   **

AT5G09750.1     GG-------RGVGELI--------------------------------------------
Sb014962_Sorbi1 PGGGPPFLPLGPGPLIDWAGLVRPVDIHGPTSSSSSSSMGGAHAALGFGFSSAGGQSSHG
Sb014961_Sorbi1 PGGGPPFLPLGPGPLIDWAGLVRPVDIHGPTSSSSSSSMGGAHAALGFGFSSAGGQSSHG
                 *        * * **                                            

AT5G09750.1     --
Sb014962_Sorbi1 MH
Sb014961_Sorbi1 MH
BoxShade v3.31 C (beta, 970507) Output
AT5G09750.1     M N N Y N M N - - - - - - - - - - - - - - - - - - P S L F Q N Y T W N - - - - - - - - - - - - - - - - - - - - - - - - -
Sb014962_Sorbi1    - - - - - - - - - - - - - - - - - M S L G S H H H P L L F D S H H P N P G P P P P P P L P F H L S S S H P A H H H P P P
Sb014961_Sorbi1    M D N I T H N S S S S S S W D L D M S L G S H H H P L L F D S H H P N P G P P P P P P L P F H L S S S H P A H H H P P P
 
AT5G09750.1     - - - - - - - - - - - - N I I N S S N N N N K N D D H H H Q H N N D P I G M A M D Q Y T Q L - - - H I F N P F S S S H F
Sb014962_Sorbi1    H P A H H H H H H P G L D P S P S S S L F P Q P H H H H H H H R L H H L G L D L D P A S H S H G H H R H H E F G E Q Q E
Sb014961_Sorbi1    H P A H H H H H H P G L D P S P S S S L F P Q P H H H H H H H R L H H L G L D L D P A S H S H G H H R H H E F G E Q Q E
 
AT5G09750.1     P P L S S S L T T T T L L S G D Q E D D E D E - - - - - - - - - - - - - - - - - - - - - - - E E P L E E L G A M K E M M
Sb014962_Sorbi1    P G G G G G - - - - - - - G G G G E E H Q E E M R Q Q Q Q H E A G G G G Q E D R G G G G A A E D V E E E L G A M K E M M
Sb014961_Sorbi1    P G G G G G - - - - - - - G G G G E E H Q E E M R Q Q Q Q H E A G G G G Q E D R G G G G A A E D V E E E L G A M K E M M
 
AT5G09750.1     Y K I A A M Q S V D I D P A T V K K P K R R N V R I S D D P Q S V A A R H R R E R I S E R I R I L Q R L V P G G T K M D
Sb014962_Sorbi1    Y R I A A M Q P V D I D P A T I K K P R R R N V R I S E D P Q S V A A R H R R E R I S E R I R I L Q R L V P G G T K M D
Sb014961_Sorbi1    Y R I A A M Q P V D I D P A T I K K P R R R N V R I S E D P Q S V A A R H R R E R I S E R I R I L Q R L V P G G T K M D
 
AT5G09750.1     T A S M L D E A I R Y V K F L K R Q I R L L N N N T G Y T P P P P Q D Q - - - - A S Q A V T T S W V S P P P P P S F G R
Sb014962_Sorbi1    T A S M L D E A I R Y I K F L K R Q V Q E L Q - - - - H Q P S P T Q Q Q Y P A S A G A G P S T S V V G V A A P - - - G R
Sb014961_Sorbi1    T A S M L D E A I R Y I K F L K R Q V Q E L Q - - - - H Q P S P T Q Q Q Y P A S A G A G P S T S V V G V A A P - - - G R
 
AT5G09750.1     G G - - - - - - - R G V G E L I - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb014962_Sorbi1    P G G G P P F L P L G P G P L I D W A G L V R P V D I H G P T S S S S S S S M G G A H A A L G F G F S S A G G Q S S H G
Sb014961_Sorbi1    P G G G P P F L P L G P G P L I D W A G L V R P V D I H G P T S S S S S S S M G G A H A A L G F G F S S A G G Q S S H G
 
AT5G09750.1     - -
Sb014962_Sorbi1    M H
Sb014961_Sorbi1    M H
 
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