fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G09750.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm021445 not found in 194aa AT5G09750.1 not_1st 0.513307984 II
Gm010467 not found in 177aa AT5G09750.1 not_1st 0.467680608 II
Gm015289 not found in 153aa AT5G09750.1 not_1st 0.456273764 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G09750.1     MNNYNMNPSLFQNYTWNNIINSS--NNNNKNDDH-------HHQHNNDPIGMAM----DQ
gm010467_Glyma0 ---MDINESI--TSTFSNVVNSTWNHEKMGTEEH-NIILHDHH---QIPKGVGIWP---H
gm015289_Glyma0 ----------------------------MGRDEHNNIILHDHHHHNQIPT-----P---H
gm021445_Glyma0 ---METNE------------------QQQQHDDH-SIILQ-----VQDPMGSGIWPINNY
                                               ::*            : *           

AT5G09750.1     YT--QLHIFNPFSSSH---FPPLSSSLTTTTLLS-GDQEDD-EDEEEPLEELGAMKEMMY
gm010467_Glyma0 YN-YPLHNIQPSSSSN---VAPSS-SNFLTDILG-VHFEEE-EDEE--EEELGAMKEMMY
gm015289_Glyma0 YNHHPLHIVQP--SSN---VAPS----FVSDVLGVVHFEEEDEDEEEVEEELGAMKEMMY
gm021445_Glyma0 QNLLQMHQTPNTTTSSTVIVPPSSSSGFLGDILG-VHHNLE-EDEEP-EEELGAMKEMMY
                 .   :*      :*    ..*         :*.  . : : ****   ***********

AT5G09750.1     KIAAMQSVDIDPATVKKPKRRNVRISDDPQSVAARHRRERISERIRILQRLVPGGTKMDT
gm010467_Glyma0 KMAVMQPVDIDPASVRKPKRRNVRISDDPQSVAARHRRERISEKIRILQRLVPGGTKMDT
gm015289_Glyma0 KMAVMQPVDIDPASVRKPKRRNVRISDDPQSVAARHRRERISEKIRILQRLVPGGTKMDT
gm021445_Glyma0 KIAAMQPVDIDPATIRKPKRRNVRISDDPQSVAARHRRERISEKIRILQRLVPGGTKMDT
                *:*.**.******:::***************************:****************

AT5G09750.1     ASMLDEAIRYVKFLKRQIRLLNNNTGYTPPPPQDQASQAVTTSWVSPPPPPSFGRGGRGV
gm010467_Glyma0 ASMLDEAIRYVKFLKRQI------------------------------------------
gm015289_Glyma0 ASMLDEAILYVKFLKRQI------------------------------------------
gm021445_Glyma0 ASMLDEAIRYVKFLKRQIRLLQ-----SIPQPSRQPPQCIGVASTTPHA-----------
                ******** *********                                          

AT5G09750.1     GELI
gm010467_Glyma0 ----
gm015289_Glyma0 ----
gm021445_Glyma0 ----
BoxShade v3.31 C (beta, 970507) Output
AT5G09750.1     M N N Y N M N P S L F Q N Y T W N N I I N S S - - N N N N K N D D H - - - - - - - H H Q H N N D P I G M A M - - - - D Q
gm010467_Glyma0    - - - M D I N E S I - - T S T F S N V V N S T W N H E K M G T E E H - N I I L H D H H - - - Q I P K G V G I W P - - - H
gm015289_Glyma0    - - - - - - - - - - - - - - - - - - - - - - - - - - - - M G R D E H N N I I L H D H H H H N Q I P T - - - - - P - - - H
gm021445_Glyma0    - - - M E T N E - - - - - - - - - - - - - - - - - - Q Q Q Q H D D H - S I I L Q - - - - - V Q D P M G S G I W P I N N Y
 
AT5G09750.1     Y T - - Q L H I F N P F S S S H - - - F P P L S S S L T T T T L L S - G D Q E D D - E D E E E P L E E L G A M K E M M Y
gm010467_Glyma0    Y N - Y P L H N I Q P S S S S N - - - V A P S S - S N F L T D I L G - V H F E E E - E D E E - - E E E L G A M K E M M Y
gm015289_Glyma0    Y N H H P L H I V Q P - - S S N - - - V A P S - - - - F V S D V L G V V H F E E E D E D E E E V E E E L G A M K E M M Y
gm021445_Glyma0    Q N L L Q M H Q T P N T T T S S T V I V P P S S S S G F L G D I L G - V H H N L E - E D E E P - E E E L G A M K E M M Y
 
AT5G09750.1     K I A A M Q S V D I D P A T V K K P K R R N V R I S D D P Q S V A A R H R R E R I S E R I R I L Q R L V P G G T K M D T
gm010467_Glyma0    K M A V M Q P V D I D P A S V R K P K R R N V R I S D D P Q S V A A R H R R E R I S E K I R I L Q R L V P G G T K M D T
gm015289_Glyma0    K M A V M Q P V D I D P A S V R K P K R R N V R I S D D P Q S V A A R H R R E R I S E K I R I L Q R L V P G G T K M D T
gm021445_Glyma0    K I A A M Q P V D I D P A T I R K P K R R N V R I S D D P Q S V A A R H R R E R I S E K I R I L Q R L V P G G T K M D T
 
AT5G09750.1     A S M L D E A I R Y V K F L K R Q I R L L N N N T G Y T P P P P Q D Q A S Q A V T T S W V S P P P P P S F G R G G R G V
gm010467_Glyma0    A S M L D E A I R Y V K F L K R Q I - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm015289_Glyma0    A S M L D E A I L Y V K F L K R Q I - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm021445_Glyma0    A S M L D E A I R Y V K F L K R Q I R L L Q - - - - - S I P Q P S R Q P P Q C I G V A S T T P H A - - - - - - - - - - -
 
AT5G09750.1     G E L I
gm010467_Glyma0    - - - -
gm015289_Glyma0    - - - -
gm021445_Glyma0    - - - -
 
0