fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G09750.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm011924 not found in 235aa AT3G50330.1 not_not 0.403041825 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G09750.1     MNNYNMNPSLFQNYTWNNIINSSNNNNKNDDHHHQHNNDPIGMAMDQYTQLHIFNPFSSS
gm011924_Glyma0 -----MDV---------DIVKTSSNNN---------NMDVMAMMM------QMENIVTTT
                     *:          :*:::*.***         * * :.* *      :: * .:::

AT5G09750.1     HFPPLSSSL---TTTTLLSGDQEDD----EDEEEPLEE------------LGAMKEMMYK
gm011924_Glyma0 --PPPTTTLVDPTPSNVVQFSKIDDLFQHQHQQQPMSQSLQPYPSEKKNSMAAMREMIFR
                  ** :::*   *.:.::. .: **    :.:::*:.:            :.**:**:::

AT5G09750.1     IAAMQSVDIDPATVKKPKRRNVRISDDPQSVAARHRRERISERIRILQRLVPGGTKMDTA
gm011924_Glyma0 IAVMQPVHIDPESIKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTA
                **.**.*.*** ::* ******:**.**********************************

AT5G09750.1     SMLDEAIRYVKFLKRQIRLLNNNTGYTPP------P----------PQDQASQAVTTSWV
gm011924_Glyma0 SMLDEAIHYVKFLKKQVQTLEQAGANTSPHSNTNSPNNHVVGAAGFPLGMSSNYSNNSSV
                *******:******:*:: *::  . *.*      *          * . :*:  ..* *

AT5G09750.1     SPP---------PPPSFGRGGRGVGELI-
gm011924_Glyma0 NYSSLLMKGGCQPCQMFGSTSK---QLLS
                . .         *   **  .:   :*:
BoxShade v3.31 C (beta, 970507) Output
AT5G09750.1     M N N Y N M N P S L F Q N Y T W N N I I N S S N N N N K N D D H H H Q H N N D P I G M A M D Q Y T Q L H I F N P F S S S
gm011924_Glyma0    - - - - - M D V - - - - - - - - - D I V K T S S N N N - - - - - - - - - N M D V M A M M M - - - - - - Q M E N I V T T T
 
AT5G09750.1     H F P P L S S S L - - - T T T T L L S G D Q E D D - - - - E D E E E P L E E - - - - - - - - - - - - L G A M K E M M Y K
gm011924_Glyma0    - - P P P T T T L V D P T P S N V V Q F S K I D D L F Q H Q H Q Q Q P M S Q S L Q P Y P S E K K N S M A A M R E M I F R
 
AT5G09750.1     I A A M Q S V D I D P A T V K K P K R R N V R I S D D P Q S V A A R H R R E R I S E R I R I L Q R L V P G G T K M D T A
gm011924_Glyma0    I A V M Q P V H I D P E S I K P P K R R N V K I S K D P Q S V A A R H R R E R I S E R I R I L Q R L V P G G T K M D T A
 
AT5G09750.1     S M L D E A I R Y V K F L K R Q I R L L N N N T G Y T P P - - - - - - P - - - - - - - - - - P Q D Q A S Q A V T T S W V
gm011924_Glyma0    S M L D E A I H Y V K F L K K Q V Q T L E Q A G A N T S P H S N T N S P N N H V V G A A G F P L G M S S N Y S N N S S V
 
AT5G09750.1     S P P - - - - - - - - - P P P S F G R G G R G V G E L I -
gm011924_Glyma0    N Y S S L L M K G G C Q P C Q M F G S T S K - - - Q L L S
 
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