fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G10280.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os024169 not found in 322aa AT1G34670.1 1st_not 0.408736349 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G10280.1     MGRSPISDDSGLKKGPWTPDEDEKLVNYVQKHGHSSWRALPKLAGLNRCGKSCRLRWTNY
Os024169_Os06t0 MGRPPCCDENGLKKGPWTPEEDEKLMSYIQKHGHASWRVLPELAGLNRCGKSCRLRWTNY
                ***.* .*:.*********:*****:.*:*****:***.**:******************

AT5G10280.1     LRPDIKRGRFSPDEEQTILNLHSVLGNKWSTIANQLPGRTDNEIKNFWNTHLKKKLIQMG
Os024169_Os06t0 LKPDIKRGNFSREEEQTILQLHSILGNKWSAIAKHLPGRTDNEIKNFWNTHLRKKLIKMG
                *:******.** :******:***:******:**::*****************:****:**

AT5G10280.1     FDPMTHRPRTDIFSGLSQLMSLSSNLRGFVDLQQQFPIDQEHTILKLQT---EMAKLQLF
Os024169_Os06t0 IDPMTHCPRTDFFQSLPQLIAL-ANLRQIIERQ---PWDGH--IEGLQTVAVQAAKLEYM
                :***** ****:*..*.**::* :*** ::: *   * * .  *  ***   : ***: :

AT5G10280.1     QYLLQPSSMSNNVNPNDFDTLSLLNSIASFKETSNN------TTSNNLDLGFLGSYLQDF
Os024169_Os06t0 QSLLH-SAVSIVTSPTTTTTTSSLNTFTTELEQTNHLCPPQVPSSSVPELA-----VQVP
                * **: *::*  ..*.   * * **::::  * :*:      .:*.  :*.     :*  

AT5G10280.1     HS-LPSLKTLNSNMEPSSVFPQNLDDNHFKFSTQRENLPVSPIWLSDPSSTTPAHVNDDL
Os024169_Os06t0 HSQMPS-TSFDQEIGKTNLFSNNIVNGNEWCSMEADNSSQKSLLV--PENSIPPLI--DM
                ** :** .:::.::  :.:*.:*: :.:   * : :* . ..: :  *..: *. :  *:

AT5G10280.1     IFNQYGIEDVNSNITSSSGQESGASAS-AAWPDHLLDDSIFSDIP
Os024169_Os06t0 PVQNF------CNTISTPNCDGGNSIPLPSWSEILLDEELMGEFA
                 .:::      .*  *:.. :.* * . .:*.: ***:.::.::.
BoxShade v3.31 C (beta, 970507) Output
AT5G10280.1     M G R S P I S D D S G L K K G P W T P D E D E K L V N Y V Q K H G H S S W R A L P K L A G L N R C G K S C R L R W T N Y
Os024169_Os06t0    M G R P P C C D E N G L K K G P W T P E E D E K L M S Y I Q K H G H A S W R V L P E L A G L N R C G K S C R L R W T N Y
 
AT5G10280.1     L R P D I K R G R F S P D E E Q T I L N L H S V L G N K W S T I A N Q L P G R T D N E I K N F W N T H L K K K L I Q M G
Os024169_Os06t0    L K P D I K R G N F S R E E E Q T I L Q L H S I L G N K W S A I A K H L P G R T D N E I K N F W N T H L R K K L I K M G
 
AT5G10280.1     F D P M T H R P R T D I F S G L S Q L M S L S S N L R G F V D L Q Q Q F P I D Q E H T I L K L Q T - - - E M A K L Q L F
Os024169_Os06t0    I D P M T H C P R T D F F Q S L P Q L I A L - A N L R Q I I E R Q - - - P W D G H - - I E G L Q T V A V Q A A K L E Y M
 
AT5G10280.1     Q Y L L Q P S S M S N N V N P N D F D T L S L L N S I A S F K E T S N N - - - - - - T T S N N L D L G F L G S Y L Q D F
Os024169_Os06t0    Q S L L H - S A V S I V T S P T T T T T T S S L N T F T T E L E Q T N H L C P P Q V P S S S V P E L A - - - - - V Q V P
 
AT5G10280.1     H S - L P S L K T L N S N M E P S S V F P Q N L D D N H F K F S T Q R E N L P V S P I W L S D P S S T T P A H V N D D L
Os024169_Os06t0    H S Q M P S - T S F D Q E I G K T N L F S N N I V N G N E W C S M E A D N S S Q K S L L V - - P E N S I P P L I - - D M
 
AT5G10280.1     I F N Q Y G I E D V N S N I T S S S G Q E S G A S A S - A A W P D H L L D D S I F S D I P
Os024169_Os06t0    P V Q N F - - - - - - C N T I S T P N C D G G N S I P L P S W S E I L L D E E L M G E F A
 
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