fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G10280.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm003821 not found in 313aa AT1G34670.1 1st_not 0.452418096 II
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G10280.1     MGRSPISDDSGLKKGPWTPDEDEKLVNYVQKHGHSSWRALPKLAGLNRCGKSCRLRWTNY
gm003821_Glyma0 MGRSPCCDEIGLKKGPWTPEEDQKLIDHIQKHGHASWRALPKLAGLNRCGKSCRLRWTNY
                ***** .*: *********:**:**::::*****:*************************

AT5G10280.1     LRPDIKRGRFSPDEEQTILNLHSVLGNKWSTIANQLPGRTDNEIKNFWNTHLKKKLIQMG
gm003821_Glyma0 LRPDIKRGKFSQEEEQTILDLHAILGNKWSAIASHLPGRTDNEIKNFWNTHLKKKLIQMG
                ********:** :******:**::******:**.:*************************

AT5G10280.1     FDPMTHRPRT-DIFSGLSQLMSLSSNLRGFVDLQQQFPIDQEHTILKLQTEMAKLQ-LFQ
gm003821_Glyma0 YDPMTHQPRIDDIFTGLSHLIAL-ANLKELLDQ----PLEQ--NLARLQ-ELAKLQCLQQ
                :*****:**  ***:***:*::* :**: ::*     *::*  .: :** *:**** * *

AT5G10280.1     YLLQP-SSMSNNVNPNDFDTLSLLNSIASFKETSNNTTSNNLDLGFLGSY-LQDFHSLPS
gm003821_Glyma0 HLLQPQASLNIDADPN-YTINSTINSTFMMNKGTINVSNDQFENIIMSSNCTMPFSDMPE
                :**** :*:. :.:** :   * :**   ::: : *.:.::::  ::.*     * .:*.

AT5G10280.1     LKTLNSNMEPSSVFPQNLDDNHFKFSTQRENLPVSPIWLSDPSSTTPAHVNDDLIFNQYG
gm003821_Glyma0 LKT-----PPSCSYEAPLSNKDMIQLSQGEIYPDSP-WLLSCSSTTPSSPS---------
                ***      **. :   *.::.:   :* *  * ** ** . *****:  .         

AT5G10280.1     IEDVNSNITSSSGQESGASASAAWPDHLLDDSIFSDIP
gm003821_Glyma0 -SLVAPPVTEVSLSTNVEDNCTIWPELLLEDPLFKMIS
                 . * . :*. * . .  . .: **: **:*.:*. *.
BoxShade v3.31 C (beta, 970507) Output
AT5G10280.1     M G R S P I S D D S G L K K G P W T P D E D E K L V N Y V Q K H G H S S W R A L P K L A G L N R C G K S C R L R W T N Y
gm003821_Glyma0    M G R S P C C D E I G L K K G P W T P E E D Q K L I D H I Q K H G H A S W R A L P K L A G L N R C G K S C R L R W T N Y
 
AT5G10280.1     L R P D I K R G R F S P D E E Q T I L N L H S V L G N K W S T I A N Q L P G R T D N E I K N F W N T H L K K K L I Q M G
gm003821_Glyma0    L R P D I K R G K F S Q E E E Q T I L D L H A I L G N K W S A I A S H L P G R T D N E I K N F W N T H L K K K L I Q M G
 
AT5G10280.1     F D P M T H R P R T - D I F S G L S Q L M S L S S N L R G F V D L Q Q Q F P I D Q E H T I L K L Q T E M A K L Q - L F Q
gm003821_Glyma0    Y D P M T H Q P R I D D I F T G L S H L I A L - A N L K E L L D Q - - - - P L E Q - - N L A R L Q - E L A K L Q C L Q Q
 
AT5G10280.1     Y L L Q P - S S M S N N V N P N D F D T L S L L N S I A S F K E T S N N T T S N N L D L G F L G S Y - L Q D F H S L P S
gm003821_Glyma0    H L L Q P Q A S L N I D A D P N - Y T I N S T I N S T F M M N K G T I N V S N D Q F E N I I M S S N C T M P F S D M P E
 
AT5G10280.1     L K T L N S N M E P S S V F P Q N L D D N H F K F S T Q R E N L P V S P I W L S D P S S T T P A H V N D D L I F N Q Y G
gm003821_Glyma0    L K T - - - - - P P S C S Y E A P L S N K D M I Q L S Q G E I Y P D S P - W L L S C S S T T P S S P S - - - - - - - - -
 
AT5G10280.1     I E D V N S N I T S S S G Q E S G A S A S A A W P D H L L D D S I F S D I P
gm003821_Glyma0    - S L V A P P V T E V S L S T N V E D N C T I W P E L L L E D P L F K M I S
 
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