fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G11060.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb009772 TFAGHRLRLSLRITVF in 344/444 AT5G25220.1 1st_not 0.567846607 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G11060.1     MAFHNNHFNHFTDQQQHQPPPPPQQQQQQHFQESAPPNWLLRSDNNFLNLHTAASAAATS
Sb009772_Sorbi1 MSF------HYPDHG--------------------------------LSMDAAAAAAAAA
                *:*      *:.*:                                 *.:.:**:***::

AT5G11060.1     SDSPSSAAANQWLSRSSSFLQRGNTANNNNNETSGDVIEDVPGGEESMIGEKKEAERWQN
Sb009772_Sorbi1 AAAAAASSPN-----PSGFSSPG-----------------VVGGE---------------
                : :.::::.*     .*.* . *                 * ***               

AT5G11060.1     ARHKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQNVVAKYSTLEAAQGLL
Sb009772_Sorbi1 -REKAAIAAHPLYERLLEAHVACLRVATPVDQLPRIDAQIAARPPPLAAAAGAAAAGGPS
                 *.** * :*****:**.*******:*************:*     :*  :   ** *  

AT5G11060.1     AGDDKELDHFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSFTGVSPGEGTG
Sb009772_Sorbi1 GGE--ELDLFMTHYVLLLCSFKEQLQQHVRVHAMEAVMGCWELEQSLQSLTGASPGEGTG
                .*:  *** *****************************.***:******:**.*******

AT5G11060.1     ATMSEDEDEQVESDAHLFDGS--LDGLGFGPLVPTESERSLMERVRQELKHELKQGYKEK
Sb009772_Sorbi1 ATMSDDEDNQVDSEANMFDGNDGSDGMGFGPLILTEGERSLVERVRQELKNELKQGYKEK
                ****:***:**:*:*::***.   **:*****: **.****:********:*********

AT5G11060.1     IVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTEEDKARLVQETGLQLKQINNW
Sb009772_Sorbi1 LVDIREEIMRKRRAGKLPGDTASVLKAWWQAHSKWPYPTEDDKARLVQETGLQLKQINNW
                :*******:************:****:***:*********:*******************

AT5G11060.1     FINQRKRNWHSNPSSSTVSKNKRRSNAGE-------------------------------
Sb009772_Sorbi1 FINQRKRNWHSNPTSSGEKTKKKRSDVGAYFARICPEAPLQWHPEDQAWRRMFCGSTFAG
                *************:**  ..:*:**:.*                                

AT5G11060.1     -------------------NSGRDR-----------------------------------
Sb009772_Sorbi1 HRLRLSLRITVFEVVEMAVSEARERKENSRTAEAGVLDQVRAGGVQTTRPLTGMKITNSP
                                   ...*:*                                   

AT5G11060.1     ------------------------------------------
Sb009772_Sorbi1 SKPNHGSYSIPSPFVVFGEKDAAGAQISWSPSPAVSVASISS
BoxShade v3.31 C (beta, 970507) Output
AT5G11060.1     M A F H N N H F N H F T D Q Q Q H Q P P P P P Q Q Q Q Q Q H F Q E S A P P N W L L R S D N N F L N L H T A A S A A A T S
Sb009772_Sorbi1    M S F - - - - - - H Y P D H G - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - L S M D A A A A A A A A A
 
AT5G11060.1     S D S P S S A A A N Q W L S R S S S F L Q R G N T A N N N N N E T S G D V I E D V P G G E E S M I G E K K E A E R W Q N
Sb009772_Sorbi1    A A A A A A S S P N - - - - - P S G F S S P G - - - - - - - - - - - - - - - - - V V G G E - - - - - - - - - - - - - - -
 
AT5G11060.1     A R H K A E I L S H P L Y E Q L L S A H V A C L R I A T P V D Q L P R I D A Q L A Q S Q N V V A K Y S T L E A A Q G L L
Sb009772_Sorbi1    - R E K A A I A A H P L Y E R L L E A H V A C L R V A T P V D Q L P R I D A Q I A A R P P P L A A A A G A A A A G G P S
 
AT5G11060.1     A G D D K E L D H F M T H Y V L L L C S F K E Q L Q Q H V R V H A M E A V M A C W E I E Q S L Q S F T G V S P G E G T G
Sb009772_Sorbi1    G G E - - E L D L F M T H Y V L L L C S F K E Q L Q Q H V R V H A M E A V M G C W E L E Q S L Q S L T G A S P G E G T G
 
AT5G11060.1     A T M S E D E D E Q V E S D A H L F D G S - - L D G L G F G P L V P T E S E R S L M E R V R Q E L K H E L K Q G Y K E K
Sb009772_Sorbi1    A T M S D D E D N Q V D S E A N M F D G N D G S D G M G F G P L I L T E G E R S L V E R V R Q E L K N E L K Q G Y K E K
 
AT5G11060.1     I V D I R E E I L R K R R A G K L P G D T T S V L K S W W Q S H S K W P Y P T E E D K A R L V Q E T G L Q L K Q I N N W
Sb009772_Sorbi1    L V D I R E E I M R K R R A G K L P G D T A S V L K A W W Q A H S K W P Y P T E D D K A R L V Q E T G L Q L K Q I N N W
 
AT5G11060.1     F I N Q R K R N W H S N P S S S T V S K N K R R S N A G E - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb009772_Sorbi1    F I N Q R K R N W H S N P T S S G E K T K K K R S D V G A Y F A R I C P E A P L Q W H P E D Q A W R R M F C G S T F A G
 
AT5G11060.1     - - - - - - - - - - - - - - - - - - - N S G R D R - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb009772_Sorbi1    H R L R L S L R I T V F E V V E M A V S E A R E R K E N S R T A E A G V L D Q V R A G G V Q T T R P L T G M K I T N S P
 
AT5G11060.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb009772_Sorbi1    S K P N H G S Y S I P S P F V V F G E K D A A G A Q I S W S P S P A V S V A S I S S
 
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