fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G11190.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm009134 not found in 173aa AT5G11190.1 1st_1st 0.621301775 Ia
Pt008236 not found in 178aa AT5G11190.1 1st_1st 0.609467455 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G11190.1     MVHSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAALLMNGQNAKT
gm009134_Glyma0 MVQAKKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAAILMNGQNAKT
pt008236_POPTR_ MVQSKKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAAILMNGQNAKT
                **:::*********************************************:*********

AT5G11190.1     NFPVVKSEEGSDHV----KDVNSPLMSPKSLSELLNAKLRKSC-KDLTPSLTCLRLDTDS
gm009134_Glyma0 NFPTSKNQAEADHD-----NNNTFL-SPKALSELLSTKLRKYC-KDPAPSLTCLRLDADN
pt008236_POPTR_ NFPTS----HLDQDTNLGKDNNSPL-PAKALAELLNSKLRKCCGKDPSPSLTCLRLDNDN
                ***.       *:      : *: * ..*:*:***.:**** * ** :********* *.

AT5G11190.1     SHIGVWQKRAGSKTSPTWVMRLELG--NVVNESAVDLGLTTMNKQNVEKEEE---EEEAI
gm009134_Glyma0 SHIGVWQKGAGPHSGSNWVMRVELGKKQIITEVEVE----------VEVEEE---EE---
pt008236_POPTR_ SHIGVWQKKAGSRSSSNWVMKVELGNYNKKTESSPT----------VEIEPENGTEE---
                ******** **.::...***::***  :  .*              ** * *   **   

AT5G11190.1     ISDEDQLAMEMIEELLNWS
gm009134_Glyma0 ---EDRVALQMIEELLNWN
pt008236_POPTR_ ---EDRIAMQMIEELLNRN
                   **::*::******* .
BoxShade v3.31 C (beta, 970507) Output
AT5G11190.1     M V H S R K F R G V R Q R Q W G S W V S E I R H P L L K R R V W L G T F E T A E A A A R A Y D Q A A L L M N G Q N A K T
gm009134_Glyma0    M V Q A K K F R G V R Q R Q W G S W V S E I R H P L L K R R V W L G T F E T A E A A A R A Y D Q A A I L M N G Q N A K T
pt008236_POPTR_    M V Q S K K F R G V R Q R Q W G S W V S E I R H P L L K R R V W L G T F E T A E A A A R A Y D Q A A I L M N G Q N A K T
 
AT5G11190.1     N F P V V K S E E G S D H V - - - - K D V N S P L M S P K S L S E L L N A K L R K S C - K D L T P S L T C L R L D T D S
gm009134_Glyma0    N F P T S K N Q A E A D H D - - - - - N N N T F L - S P K A L S E L L S T K L R K Y C - K D P A P S L T C L R L D A D N
pt008236_POPTR_    N F P T S - - - - H L D Q D T N L G K D N N S P L - P A K A L A E L L N S K L R K C C G K D P S P S L T C L R L D N D N
 
AT5G11190.1     S H I G V W Q K R A G S K T S P T W V M R L E L G - - N V V N E S A V D L G L T T M N K Q N V E K E E E - - - E E E A I
gm009134_Glyma0    S H I G V W Q K G A G P H S G S N W V M R V E L G K K Q I I T E V E V E - - - - - - - - - - V E V E E E - - - E E - - -
pt008236_POPTR_    S H I G V W Q K K A G S R S S S N W V M K V E L G N Y N K K T E S S P T - - - - - - - - - - V E I E P E N G T E E - - -
 
AT5G11190.1     I S D E D Q L A M E M I E E L L N W S
gm009134_Glyma0    - - - E D R V A L Q M I E E L L N W N
pt008236_POPTR_    - - - E D R I A M Q M I E E L L N R N
 
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