fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G11190.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt005519 not found in 208aa AT5G11190.1 not_1st 0.591715976 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G11190.1     ----------------MVHSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAAR
pt005519_POPTR_ MILICSSVFLSFLSQIMVQSKKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAAR
                                **:*:***************************************

AT5G11190.1     AYDQAALLMNGQNAKTNFPVVKSEEGSDHVKDVNSPLMSPKSLSELLNAKLRKSC-KDLT
pt005519_POPTR_ AYDQAAILMNGQNAKTNFPASHLDQDTKLGKDNNSPLPA-KALAELLYSKLRKCCGKDPS
                ******:************. : ::.:.  ** **** : *:*:*** :****.* ** :

AT5G11190.1     PSLTCLRLDTDSSHIGVWQKRAGSKTSPTWVMRLELGNVVNESAVDL-----GLTTMNKQ
pt005519_POPTR_ PSLTCLRLDNDNSHIGVWQKKAGSCSSSNWVMRVELGNSNRKSTQVMEELRPSLSSESSS
                *********.*.********:*** :*..****:****  .:*:  :     .*:: ...

AT5G11190.1     NVEKEEEEEEAIISDEDQLAMEMIEELLNWS
pt005519_POPTR_ RVEIEPEINGT--DEEDKIAMQMIDELLNCN
                .** * * : :  .:**::**:**:**** .
BoxShade v3.31 C (beta, 970507) Output
AT5G11190.1     - - - - - - - - - - - - - - - - M V H S R K F R G V R Q R Q W G S W V S E I R H P L L K R R V W L G T F E T A E A A A R
pt005519_POPTR_    M I L I C S S V F L S F L S Q I M V Q S K K F R G V R Q R Q W G S W V S E I R H P L L K R R V W L G T F E T A E A A A R
 
AT5G11190.1     A Y D Q A A L L M N G Q N A K T N F P V V K S E E G S D H V K D V N S P L M S P K S L S E L L N A K L R K S C - K D L T
pt005519_POPTR_    A Y D Q A A I L M N G Q N A K T N F P A S H L D Q D T K L G K D N N S P L P A - K A L A E L L Y S K L R K C C G K D P S
 
AT5G11190.1     P S L T C L R L D T D S S H I G V W Q K R A G S K T S P T W V M R L E L G N V V N E S A V D L - - - - - G L T T M N K Q
pt005519_POPTR_    P S L T C L R L D N D N S H I G V W Q K K A G S C S S S N W V M R V E L G N S N R K S T Q V M E E L R P S L S S E S S S
 
AT5G11190.1     N V E K E E E E E E A I I S D E D Q L A M E M I E E L L N W S
pt005519_POPTR_    R V E I E P E I N G T - - D E E D K I A M Q M I D E L L N C N
 
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