fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G11190.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt009469 not found in 206aa AT1G15360.1 not_not 0.544378698 III
Pt010625 not found in 179aa AT1G15360.1 not_not 0.526627218 III
Pt007094 not found in 208aa AT1G15360.1 not_not 0.505917159 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G11190.1     MVHSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAALLMNGQNAKT
pt007094_POPTR_ MVPSKKFRGVRQRRWGSWVSEIRHPLVKRRVWLGTFETAEEAARAYDQAAILMSGRNAKT
pt010625_POPTR_ MVQSKKFRGVRQRHWGSWVSEIRHPLLKRRVWLGTFDTAEEAARAYDEAAILMSGRNAKT
pt009469_POPTR_ MVQSKKFRGVRQRHWGSWVSEIRHPLLKRRVWLGTFETAEEAARAYDQAAILMSGRNAKT
                ** *:********:************:*********:*** ******:**:**.*:****

AT5G11190.1     NFPV--------VKSEEGSDHVKDVNSPLMSPKSLSELLNAKLRKSCKDLTPSLTCLRLD
pt007094_POPTR_ NFPM--PQTSN-EDDPKSSDHQPSLTTP---PNGLSQILHAKLRKCSKAPSPSMTCLRLD
pt010625_POPTR_ NFPVVANQTRNGQNSPSSSS-----------------ALSAKLRKYCRSPYPSLTCLRLD
pt009469_POPTR_ NFPI--PQTSN-EEDPKSSD-EASLPTP---PNGLSEILHAKLRKCSKAPSPSMTCLRLD
                ***:         .. ..*.                  * ***** .:   **:******

AT5G11190.1     TDSSHIGVWQKRAGSKTSPTWVMRLELGNV----VNESAVDLGLTT----MNKQNVEKEE
pt007094_POPTR_ AENS-IGVWQKRAGQRSDSNWVMTVQLGKRDESQVSESALPLPD------QSPGGISGPE
pt010625_POPTR_ AENCHIGVWQKRAGPRSVSNWIMTVELGKKDGRQAPEQKILISDTSDMAGQEGGSDDGP-
pt009469_POPTR_ TENSLIGVWQKRAGERSDSNWVMRVQLGQR-ESQVSESTLPLP-------QSSGGVSEPE
                ::.. ********* :: ..*:* ::**:     . *. : :         .  . .   

AT5G11190.1     EEEEAIISDEDQLAMEMIEELLNWS------------------
pt007094_POPTR_ WREE--MDKEERVALQMVEELLNRNCPSPPFGVQDHDDDSFFL
pt010625_POPTR_ -------DDEERVALQMIEELLNR-------------------
pt009469_POPTR_ LRAE--MGEDERIALQMIEELLNRNCPSPSFGVQDHGDGSLFL
                       ..::::*::*:*****
BoxShade v3.31 C (beta, 970507) Output
AT5G11190.1     M V H S R K F R G V R Q R Q W G S W V S E I R H P L L K R R V W L G T F E T A E A A A R A Y D Q A A L L M N G Q N A K T
pt007094_POPTR_    M V P S K K F R G V R Q R R W G S W V S E I R H P L V K R R V W L G T F E T A E E A A R A Y D Q A A I L M S G R N A K T
pt010625_POPTR_    M V Q S K K F R G V R Q R H W G S W V S E I R H P L L K R R V W L G T F D T A E E A A R A Y D E A A I L M S G R N A K T
pt009469_POPTR_    M V Q S K K F R G V R Q R H W G S W V S E I R H P L L K R R V W L G T F E T A E E A A R A Y D Q A A I L M S G R N A K T
 
AT5G11190.1     N F P V - - - - - - - - V K S E E G S D H V K D V N S P L M S P K S L S E L L N A K L R K S C K D L T P S L T C L R L D
pt007094_POPTR_    N F P M - - P Q T S N - E D D P K S S D H Q P S L T T P - - - P N G L S Q I L H A K L R K C S K A P S P S M T C L R L D
pt010625_POPTR_    N F P V V A N Q T R N G Q N S P S S S S - - - - - - - - - - - - - - - - - A L S A K L R K Y C R S P Y P S L T C L R L D
pt009469_POPTR_    N F P I - - P Q T S N - E E D P K S S D - E A S L P T P - - - P N G L S E I L H A K L R K C S K A P S P S M T C L R L D
 
AT5G11190.1     T D S S H I G V W Q K R A G S K T S P T W V M R L E L G N V - - - - V N E S A V D L G L T T - - - - M N K Q N V E K E E
pt007094_POPTR_    A E N S - I G V W Q K R A G Q R S D S N W V M T V Q L G K R D E S Q V S E S A L P L P D - - - - - - Q S P G G I S G P E
pt010625_POPTR_    A E N C H I G V W Q K R A G P R S V S N W I M T V E L G K K D G R Q A P E Q K I L I S D T S D M A G Q E G G S D D G P -
pt009469_POPTR_    T E N S L I G V W Q K R A G E R S D S N W V M R V Q L G Q R - E S Q V S E S T L P L P - - - - - - - Q S S G G V S E P E
 
AT5G11190.1     E E E E A I I S D E D Q L A M E M I E E L L N W S - - - - - - - - - - - - - - - - - -
pt007094_POPTR_    W R E E - - M D K E E R V A L Q M V E E L L N R N C P S P P F G V Q D H D D D S F F L
pt010625_POPTR_    - - - - - - - D D E E R V A L Q M I E E L L N R - - - - - - - - - - - - - - - - - - -
pt009469_POPTR_    L R A E - - M G E D E R I A L Q M I E E L L N R N C P S P S F G V Q D H G D G S L F L
 
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