fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G11190.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt008236 not found in 178aa AT5G11190.1 1st_1st 0.609467455 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G11190.1     MVHSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAALLMNGQNAKT
pt008236_POPTR_ MVQSKKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAAILMNGQNAKT
                **:*:*********************************************:*********

AT5G11190.1     NFPVVKSEEGSDHVKDVNSPLMSPKSLSELLNAKLRKSC-KDLTPSLTCLRLDTDSSHIG
pt008236_POPTR_ NFPTSHLDQDTNLGKDNNSPLPA-KALAELLNSKLRKCCGKDPSPSLTCLRLDNDNSHIG
                ***. : ::.::  ** **** : *:*:****:****.* ** :*********.*.****

AT5G11190.1     VWQKRAGSKTSPTWVMRLELGNVVNESAVDLGLTTMNKQN-------VEKEEEEEEAIIS
pt008236_POPTR_ VWQKKAGSRSSSNWVMKVELGN-------------YNKKTESSPTVEIEPENGTEE----
                ****:***::*..***::****              **:.       :* *:  **    

AT5G11190.1     DEDQLAMEMIEELLNWS
pt008236_POPTR_ -EDRIAMQMIEELLNRN
                 **::**:******* .
BoxShade v3.31 C (beta, 970507) Output
AT5G11190.1     M V H S R K F R G V R Q R Q W G S W V S E I R H P L L K R R V W L G T F E T A E A A A R A Y D Q A A L L M N G Q N A K T
pt008236_POPTR_    M V Q S K K F R G V R Q R Q W G S W V S E I R H P L L K R R V W L G T F E T A E A A A R A Y D Q A A I L M N G Q N A K T
 
AT5G11190.1     N F P V V K S E E G S D H V K D V N S P L M S P K S L S E L L N A K L R K S C - K D L T P S L T C L R L D T D S S H I G
pt008236_POPTR_    N F P T S H L D Q D T N L G K D N N S P L P A - K A L A E L L N S K L R K C C G K D P S P S L T C L R L D N D N S H I G
 
AT5G11190.1     V W Q K R A G S K T S P T W V M R L E L G N V V N E S A V D L G L T T M N K Q N - - - - - - - V E K E E E E E E A I I S
pt008236_POPTR_    V W Q K K A G S R S S S N W V M K V E L G N - - - - - - - - - - - - - Y N K K T E S S P T V E I E P E N G T E E - - - -
 
AT5G11190.1     D E D Q L A M E M I E E L L N W S
pt008236_POPTR_    - E D R I A M Q M I E E L L N R N
 
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