fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G11190.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os006902 not found in 205aa AT1G15360.1 1st_not 0.520710059 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G11190.1     MVH-SRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAALLMNGQNAK
Os006902_Os02t0 MVQPKKKFRGVRQRHWGSWVSEIRHPLLKRRVWLGTFETAEEAARAYDEAAVLMSGRNAK
                **: .:********:************************** ******:**:**.*:***

AT5G11190.1     TNFPVVKSEEG-------SDHVKDVNSPLMSPKSLSELLNAKLRKSCKDLTPSLTCLRLD
Os006902_Os02t0 TNFPVQRNSTGDLATAADQDARSNGGSRNSSAGNLSQILSAKLRKCCKAPSPSLTCLRLD
                ***** :.. *       .*  .: .*   *. .**::*.*****.**  :*********

AT5G11190.1     TDSSHIGVWQKRAGSKTSPTWVMRLELGNVV--NESAVDLGLTTMNKQNVEKEEEEEEAI
Os006902_Os02t0 PEKSHIGVWQKRAGARADSNWVMTVELNKEVEPTEPAAQPTSTATASQ----------VT
                .:.***********:::...*** :**.: *  .*.*.:   *:  .*          . 

AT5G11190.1     ISDEDQLAMEMIEELLNWS----------------
Os006902_Os02t0 MDDEEKIALQMIEELLSRSSPASPSHGEGEGSFVI
                :.**:::*::******. *
BoxShade v3.31 C (beta, 970507) Output
AT5G11190.1     M V H - S R K F R G V R Q R Q W G S W V S E I R H P L L K R R V W L G T F E T A E A A A R A Y D Q A A L L M N G Q N A K
Os006902_Os02t0    M V Q P K K K F R G V R Q R H W G S W V S E I R H P L L K R R V W L G T F E T A E E A A R A Y D E A A V L M S G R N A K
 
AT5G11190.1     T N F P V V K S E E G - - - - - - - S D H V K D V N S P L M S P K S L S E L L N A K L R K S C K D L T P S L T C L R L D
Os006902_Os02t0    T N F P V Q R N S T G D L A T A A D Q D A R S N G G S R N S S A G N L S Q I L S A K L R K C C K A P S P S L T C L R L D
 
AT5G11190.1     T D S S H I G V W Q K R A G S K T S P T W V M R L E L G N V V - - N E S A V D L G L T T M N K Q N V E K E E E E E E A I
Os006902_Os02t0    P E K S H I G V W Q K R A G A R A D S N W V M T V E L N K E V E P T E P A A Q P T S T A T A S Q - - - - - - - - - - V T
 
AT5G11190.1     I S D E D Q L A M E M I E E L L N W S - - - - - - - - - - - - - - - -
Os006902_Os02t0    M D D E E K I A L Q M I E E L L S R S S P A S P S H G E G E G S F V I
 
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