fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G11190.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb009863 not found in 204aa AT1G15360.1 1st_not 0.535502958 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G11190.1     MVHSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAALLMNGQNAKT
Sb009863_Sorbi1 MVQPKKFRGVRQRHWGSWVSEIRHPLLKRRVWLGTFETAEEAARAYDEAAVLMSGRNAKT
                **:.:********:************************** ******:**:**.*:****

AT5G11190.1     NFPVVKSEEGSDHV---KDVNSPLMSPKS---LSELLNAKLRKSCKDLTPSLTCLRLDTD
Sb009863_Sorbi1 NFPVQRSSTGEPTPAAGRDAHSNAGSGSSTANLSQILSAKLRKCCKAPSPSLTCLRLDPE
                **** :*. *.      :*.:*   * .*   **::*.*****.**  :*********.:

AT5G11190.1     SSHIGVWQKRAGSKTSPTWVMRLELGNVVNESAVDLGLTTMNKQNVEKEEEEEEAIISDE
Sb009863_Sorbi1 KSHIGVWQKRAGARADSNWVMTVEL----NKGAAS---TDAASQSTSATTAPPATPMDDE
                .***********:::...*** :**    *:.*..   *   .*...       : :.**

AT5G11190.1     DQLAMEMIEELLNWS----------------
Sb009863_Sorbi1 ERIALQMIEELLSSSSPASPSHGDDQGRFII
                :::*::******. *
BoxShade v3.31 C (beta, 970507) Output
AT5G11190.1     M V H S R K F R G V R Q R Q W G S W V S E I R H P L L K R R V W L G T F E T A E A A A R A Y D Q A A L L M N G Q N A K T
Sb009863_Sorbi1    M V Q P K K F R G V R Q R H W G S W V S E I R H P L L K R R V W L G T F E T A E E A A R A Y D E A A V L M S G R N A K T
 
AT5G11190.1     N F P V V K S E E G S D H V - - - K D V N S P L M S P K S - - - L S E L L N A K L R K S C K D L T P S L T C L R L D T D
Sb009863_Sorbi1    N F P V Q R S S T G E P T P A A G R D A H S N A G S G S S T A N L S Q I L S A K L R K C C K A P S P S L T C L R L D P E
 
AT5G11190.1     S S H I G V W Q K R A G S K T S P T W V M R L E L G N V V N E S A V D L G L T T M N K Q N V E K E E E E E E A I I S D E
Sb009863_Sorbi1    K S H I G V W Q K R A G A R A D S N W V M T V E L - - - - N K G A A S - - - T D A A S Q S T S A T T A P P A T P M D D E
 
AT5G11190.1     D Q L A M E M I E E L L N W S - - - - - - - - - - - - - - - -
Sb009863_Sorbi1    E R I A L Q M I E E L L S S S S P A S P S H G D D Q G R F I I
 
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