fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G11190.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb003993 not found in 235aa AT1G15360.1 not_not 0.5 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G11190.1     MVHS-RKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAALLMNGQNAK
Sb003993_Sorbi1 MVQSKKKFRGVRQRHWGSWVSEIRHPLLKRRVWLGTFETAEEAARAYDEAAVLMSGRNAK
                **:* :********:************************** ******:**:**.*:***

AT5G11190.1     TNFPVVKSEEGS----DHVKDV------NSPLMSP----KSLSELLNAKLRKSCKDLTPS
Sb003993_Sorbi1 TNFPVPRTATGELAPVPAARDARGGGGSSSAAAAPGGGTSNLSQILSAKLRKCCKTPSPS
                ***** ::  *.      .:*.      .*.  :*    ..**::*.*****.**  :**

AT5G11190.1     LTCLRLDTDSSHIGVWQKRAGSKTSPTWVMRLELGNVVNESAVDLG--------------
Sb003993_Sorbi1 LTCLRLDPEKSHIGVWQKRAGARADSSWVMTVQLNKDVPPPASSSGEEPVPSDGGAAATT
                *******.:.***********:::..:*** ::*.: *  .* . *              

AT5G11190.1     -LTTMNKQNVEKEEEEEEA-IISDEDQLAMEMIEELLNWS---------------
Sb003993_Sorbi1 PTSTSTSSTVTTTGSPPPAMMMDDEERIALQMIEELLGSSHSHGMFQGAAGSIVI
                  :* ....* .  .   * ::.**:::*::******. *
BoxShade v3.31 C (beta, 970507) Output
AT5G11190.1     M V H S - R K F R G V R Q R Q W G S W V S E I R H P L L K R R V W L G T F E T A E A A A R A Y D Q A A L L M N G Q N A K
Sb003993_Sorbi1    M V Q S K K K F R G V R Q R H W G S W V S E I R H P L L K R R V W L G T F E T A E E A A R A Y D E A A V L M S G R N A K
 
AT5G11190.1     T N F P V V K S E E G S - - - - D H V K D V - - - - - - N S P L M S P - - - - K S L S E L L N A K L R K S C K D L T P S
Sb003993_Sorbi1    T N F P V P R T A T G E L A P V P A A R D A R G G G G S S S A A A A P G G G T S N L S Q I L S A K L R K C C K T P S P S
 
AT5G11190.1     L T C L R L D T D S S H I G V W Q K R A G S K T S P T W V M R L E L G N V V N E S A V D L G - - - - - - - - - - - - - -
Sb003993_Sorbi1    L T C L R L D P E K S H I G V W Q K R A G A R A D S S W V M T V Q L N K D V P P P A S S S G E E P V P S D G G A A A T T
 
AT5G11190.1     - L T T M N K Q N V E K E E E E E E A - I I S D E D Q L A M E M I E E L L N W S - - - - - - - - - - - - - - -
Sb003993_Sorbi1    P T S T S T S S T V T T T G S P P P A M M M D D E E R I A L Q M I E E L L G S S H S H G M F Q G A A G S I V I
 
0