fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G11190.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb009863 not found in 204aa AT1G15360.1 1st_not 0.535502958 II
Sb003993 not found in 235aa AT1G15360.1 not_not 0.5 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G11190.1     MVHS-RKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAALLMNGQNAK
Sb003993_Sorbi1 MVQSKKKFRGVRQRHWGSWVSEIRHPLLKRRVWLGTFETAEEAARAYDEAAVLMSGRNAK
Sb009863_Sorbi1 MVQP-KKFRGVRQRHWGSWVSEIRHPLLKRRVWLGTFETAEEAARAYDEAAVLMSGRNAK
                **:. :********:************************** ******:**:**.*:***

AT5G11190.1     TNFPVVKSEEGS---------DHVKDVNS------PLMSPKSLSELLNAKLRKSCKDLTP
Sb003993_Sorbi1 TNFPVPRTATGELAPVPAA-RDARGGGGSSSAAAAPGGGTSNLSQILSAKLRKCCKTPSP
Sb009863_Sorbi1 TNFPVQRSSTGE--PTPAAGRDAHSNAGS-------GSSTANLSQILSAKLRKCCKAPSP
                ***** ::  *.         *   . .*         .. .**::*.*****.**  :*

AT5G11190.1     SLTCLRLDTDSSHIGVWQKRAGSKTSPTWVMRLELGNVV----------------NESAV
Sb003993_Sorbi1 SLTCLRLDPEKSHIGVWQKRAGARADSSWVMTVQLNKDVPPPASSSGEEPVPSDGGAAAT
Sb009863_Sorbi1 SLTCLRLDPEKSHIGVWQKRAGARADSNWVMTVELNK------------------GAAST
                ********.:.***********:::...*** ::*.:                  . ::.

AT5G11190.1     DLGLTTMNKQNVEKEEEEEEAIISDEDQLAMEMIEELLNWS-------------------
Sb003993_Sorbi1 TPTSTSTSSTVTTTGSPPPAMMMDDEERIALQMIEELLGSSH----SHGMFQGAAGSIVI
Sb009863_Sorbi1 DAASQSTSAT-----TAPPATPMDDEERIALQMIEELLSSSSPASPSHGDDQ---GRFII
                     : .              :.**:::*::******. *
BoxShade v3.31 C (beta, 970507) Output
AT5G11190.1     M V H S - R K F R G V R Q R Q W G S W V S E I R H P L L K R R V W L G T F E T A E A A A R A Y D Q A A L L M N G Q N A K
Sb003993_Sorbi1    M V Q S K K K F R G V R Q R H W G S W V S E I R H P L L K R R V W L G T F E T A E E A A R A Y D E A A V L M S G R N A K
Sb009863_Sorbi1    M V Q P - K K F R G V R Q R H W G S W V S E I R H P L L K R R V W L G T F E T A E E A A R A Y D E A A V L M S G R N A K
 
AT5G11190.1     T N F P V V K S E E G S - - - - - - - - - D H V K D V N S - - - - - - P L M S P K S L S E L L N A K L R K S C K D L T P
Sb003993_Sorbi1    T N F P V P R T A T G E L A P V P A A - R D A R G G G G S S S A A A A P G G G T S N L S Q I L S A K L R K C C K T P S P
Sb009863_Sorbi1    T N F P V Q R S S T G E - - P T P A A G R D A H S N A G S - - - - - - - G S S T A N L S Q I L S A K L R K C C K A P S P
 
AT5G11190.1     S L T C L R L D T D S S H I G V W Q K R A G S K T S P T W V M R L E L G N V V - - - - - - - - - - - - - - - - N E S A V
Sb003993_Sorbi1    S L T C L R L D P E K S H I G V W Q K R A G A R A D S S W V M T V Q L N K D V P P P A S S S G E E P V P S D G G A A A T
Sb009863_Sorbi1    S L T C L R L D P E K S H I G V W Q K R A G A R A D S N W V M T V E L N K - - - - - - - - - - - - - - - - - - G A A S T
 
AT5G11190.1     D L G L T T M N K Q N V E K E E E E E E A I I S D E D Q L A M E M I E E L L N W S - - - - - - - - - - - - - - - - - - -
Sb003993_Sorbi1    T P T S T S T S S T V T T T G S P P P A M M M D D E E R I A L Q M I E E L L G S S H - - - - S H G M F Q G A A G S I V I
Sb009863_Sorbi1    D A A S Q S T S A T - - - - - T A P P A T P M D D E E R I A L Q M I E E L L S S S S P A S P S H G D D Q - - - G R F I I
 
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