fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G11190.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm014342 not found in 185aa AT5G11190.1 not_1st 0.615384615 II
Gm014341 not found in 185aa AT5G11190.1 not_1st 0.615384615 II
Gm047682 not found in 199aa AT5G11190.1 not_1st 0.553254437 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G11190.1     MVHSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAALLMNGQNAKT
gm014342_Glyma0 MVQTKKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAAILMNGQNAKT
gm047682_Glyma1 MVQAKKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAAILMSGQNAKT
gm014341_Glyma0 MVQTKKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAAILMNGQNAKT
                **:::*********************************************:**.******

AT5G11190.1     NFPVVKSE-EGSDHVKDVNSPLMSPKSLSELLNAKLRKSCKDLTPSLTCLRLDTDSSHIG
gm014342_Glyma0 NFPTSKNQAEADDNNN--TDTFLSPKALSELLSTKLRKYCKDPAPSLTCLRLDADNSHIG
gm047682_Glyma1 NFPTQMNQPQGATTTTPCVDPFSSPNVLSEHLSRKLKRCCKDPSPSLTCLRLDADNSHIG
gm014341_Glyma0 NFPTSKNQAEADDNNN--TDTFLSPKALSELLSTKLRKYCKDPAPSLTCLRLDADNSHIG
                ***.  .: :.    .   ..: **: *** *. **:: *** :*********:*.****

AT5G11190.1     VWQKRAGSKTSPTWVMRLELGNV-VNESAVDLGLTTMNKQNVEKEEEEE---EAIISDED
gm014342_Glyma0 VWQKGAGPHSGSNWVMRLELGKKQITEEGSESTESPQSSTNGATENNEV-------EEED
gm047682_Glyma1 VWQKGAGPHSDSNWIVRVEIGKK-LHAEG-ESSSVSSSAAGGSPPKPSVGHGDGYGDEED
gm014341_Glyma0 VWQKGAGPHSGSNWVMRLELGKKQITEEGSESTESPQSSTNGATENNEV-------EEED
                **** **.::...*::*:*:*:  :  .. :    . .  .    : .        .:**

AT5G11190.1     QLAMEMIEELLNWS-------
gm014342_Glyma0 RVALQMIEELLNWN-------
gm047682_Glyma1 RIAMQMIDELLNWNHPCGSSN
gm014341_Glyma0 RVALQMIEELLNWN-------
                ::*::**:*****.
BoxShade v3.31 C (beta, 970507) Output
AT5G11190.1     M V H S R K F R G V R Q R Q W G S W V S E I R H P L L K R R V W L G T F E T A E A A A R A Y D Q A A L L M N G Q N A K T
gm014342_Glyma0    M V Q T K K F R G V R Q R Q W G S W V S E I R H P L L K R R V W L G T F E T A E A A A R A Y D Q A A I L M N G Q N A K T
gm047682_Glyma1    M V Q A K K F R G V R Q R Q W G S W V S E I R H P L L K R R V W L G T F E T A E A A A R A Y D Q A A I L M S G Q N A K T
gm014341_Glyma0    M V Q T K K F R G V R Q R Q W G S W V S E I R H P L L K R R V W L G T F E T A E A A A R A Y D Q A A I L M N G Q N A K T
 
AT5G11190.1     N F P V V K S E - E G S D H V K D V N S P L M S P K S L S E L L N A K L R K S C K D L T P S L T C L R L D T D S S H I G
gm014342_Glyma0    N F P T S K N Q A E A D D N N N - - T D T F L S P K A L S E L L S T K L R K Y C K D P A P S L T C L R L D A D N S H I G
gm047682_Glyma1    N F P T Q M N Q P Q G A T T T T P C V D P F S S P N V L S E H L S R K L K R C C K D P S P S L T C L R L D A D N S H I G
gm014341_Glyma0    N F P T S K N Q A E A D D N N N - - T D T F L S P K A L S E L L S T K L R K Y C K D P A P S L T C L R L D A D N S H I G
 
AT5G11190.1     V W Q K R A G S K T S P T W V M R L E L G N V - V N E S A V D L G L T T M N K Q N V E K E E E E E - - - E A I I S D E D
gm014342_Glyma0    V W Q K G A G P H S G S N W V M R L E L G K K Q I T E E G S E S T E S P Q S S T N G A T E N N E V - - - - - - - E E E D
gm047682_Glyma1    V W Q K G A G P H S D S N W I V R V E I G K K - L H A E G - E S S S V S S S A A G G S P P K P S V G H G D G Y G D E E D
gm014341_Glyma0    V W Q K G A G P H S G S N W V M R L E L G K K Q I T E E G S E S T E S P Q S S T N G A T E N N E V - - - - - - - E E E D
 
AT5G11190.1     Q L A M E M I E E L L N W S - - - - - - -
gm014342_Glyma0    R V A L Q M I E E L L N W N - - - - - - -
gm047682_Glyma1    R I A M Q M I D E L L N W N H P C G S S N
gm014341_Glyma0    R V A L Q M I E E L L N W N - - - - - - -
 
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