fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G11190.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm009134 not found in 173aa AT5G11190.1 1st_1st 0.621301775 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G11190.1     MVHSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAALLMNGQNAKT
gm009134_Glyma0 MVQAKKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAAILMNGQNAKT
                **:::*********************************************:*********

AT5G11190.1     NFPVVKSEEGSDHVKDVNSPLMSPKSLSELLNAKLRKSCKDLTPSLTCLRLDTDSSHIGV
gm009134_Glyma0 NFPTSKNQAEADH--DNNNTFLSPKALSELLSTKLRKYCKDPAPSLTCLRLDADNSHIGV
                ***. *.:  :**  * *..::***:*****.:**** *** :*********:*.*****

AT5G11190.1     WQKRAGSKTSPTWVMRLELG--NVVNESAVDLGLTTMNKQNVEKEEEEEEAIISDEDQLA
gm009134_Glyma0 WQKGAGPHSGSNWVMRVELGKKQIITEVEVE----------VEVEEEEE------EDRVA
                *** **.::...****:***  :::.*  *:          ** *****      **::*

AT5G11190.1     MEMIEELLNWS
gm009134_Glyma0 LQMIEELLNWN
                ::********.
BoxShade v3.31 C (beta, 970507) Output
AT5G11190.1     M V H S R K F R G V R Q R Q W G S W V S E I R H P L L K R R V W L G T F E T A E A A A R A Y D Q A A L L M N G Q N A K T
gm009134_Glyma0    M V Q A K K F R G V R Q R Q W G S W V S E I R H P L L K R R V W L G T F E T A E A A A R A Y D Q A A I L M N G Q N A K T
 
AT5G11190.1     N F P V V K S E E G S D H V K D V N S P L M S P K S L S E L L N A K L R K S C K D L T P S L T C L R L D T D S S H I G V
gm009134_Glyma0    N F P T S K N Q A E A D H - - D N N N T F L S P K A L S E L L S T K L R K Y C K D P A P S L T C L R L D A D N S H I G V
 
AT5G11190.1     W Q K R A G S K T S P T W V M R L E L G - - N V V N E S A V D L G L T T M N K Q N V E K E E E E E E A I I S D E D Q L A
gm009134_Glyma0    W Q K G A G P H S G S N W V M R V E L G K K Q I I T E V E V E - - - - - - - - - - V E V E E E E E - - - - - - E D R V A
 
AT5G11190.1     M E M I E E L L N W S
gm009134_Glyma0    L Q M I E E L L N W N
 
0