Input
| Putative repression domain
|
|
AT5G11260.1 |
not found |
|
Ortholog
| Putative repression domain
| Reverse top hit
| Relation
| Blast score ratio
| Type
|
Pt008406 |
not found in 168aa |
AT5G11260.1 |
1st_1st |
0.751131221 |
Ia |
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.
CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)
AT5G11260.1 MQEQATSSLAASSLPSSSERSSSSAPHLEIKEGIESDEEIRRVPEFGGEAVGKETSGRES
pt008406_POPTR_ MQEQTTSSIPANSLPSSSERSSSSAPQLEVKEGMESDEEIRRVPEMSGEPAGTSASGRET
****:***:.*.**************:**:***:***********:.**..*..:****:
AT5G11260.1 GSATGQERTQAT-VGESQRKRGRTPAEKENKRLKRLLRNRVSAQQARERKKAYLSELENR
pt008406_POPTR_ GSNAGPDRVQPTGEGQSQRKRGRSPADKENKRLKRLLRNRVSAQQARERKKAYLTELETR
** :* :*.*.* *:*******:**:***************************:***.*
AT5G11260.1 VKDLENKNSELEERLSTLQNENQMLRHILKNTTGNKRGGGGGSNADASL
pt008406_POPTR_ VKDLEKKNSELEERLSTLQNENQMLRQILKNTTASRKGGSSGTNADGS-
*****:********************:******..::**..*:***.*
BoxShade v3.31 C (beta, 970507) Output
AT5G11260.1 |
M |
Q |
E |
Q |
A |
T |
S |
S |
L |
A |
A |
S |
S |
L |
P |
S |
S |
S |
E |
R |
S |
S |
S |
S |
A |
P |
H |
L |
E |
I |
K |
E |
G |
I |
E |
S |
D |
E |
E |
I |
R |
R |
V |
P |
E |
F |
G |
G |
E |
A |
V |
G |
K |
E |
T |
S |
G |
R |
E |
S |
pt008406_POPTR_ |
M |
Q |
E |
Q |
T |
T |
S |
S |
I |
P |
A |
N |
S |
L |
P |
S |
S |
S |
E |
R |
S |
S |
S |
S |
A |
P |
Q |
L |
E |
V |
K |
E |
G |
M |
E |
S |
D |
E |
E |
I |
R |
R |
V |
P |
E |
M |
S |
G |
E |
P |
A |
G |
T |
S |
A |
S |
G |
R |
E |
T |
|
AT5G11260.1 |
G |
S |
A |
T |
G |
Q |
E |
R |
T |
Q |
A |
T |
- |
V |
G |
E |
S |
Q |
R |
K |
R |
G |
R |
T |
P |
A |
E |
K |
E |
N |
K |
R |
L |
K |
R |
L |
L |
R |
N |
R |
V |
S |
A |
Q |
Q |
A |
R |
E |
R |
K |
K |
A |
Y |
L |
S |
E |
L |
E |
N |
R |
pt008406_POPTR_ |
G |
S |
N |
A |
G |
P |
D |
R |
V |
Q |
P |
T |
G |
E |
G |
Q |
S |
Q |
R |
K |
R |
G |
R |
S |
P |
A |
D |
K |
E |
N |
K |
R |
L |
K |
R |
L |
L |
R |
N |
R |
V |
S |
A |
Q |
Q |
A |
R |
E |
R |
K |
K |
A |
Y |
L |
T |
E |
L |
E |
T |
R |
|
AT5G11260.1 |
V |
K |
D |
L |
E |
N |
K |
N |
S |
E |
L |
E |
E |
R |
L |
S |
T |
L |
Q |
N |
E |
N |
Q |
M |
L |
R |
H |
I |
L |
K |
N |
T |
T |
G |
N |
K |
R |
G |
G |
G |
G |
G |
S |
N |
A |
D |
A |
S |
L |
pt008406_POPTR_ |
V |
K |
D |
L |
E |
K |
K |
N |
S |
E |
L |
E |
E |
R |
L |
S |
T |
L |
Q |
N |
E |
N |
Q |
M |
L |
R |
Q |
I |
L |
K |
N |
T |
T |
A |
S |
R |
K |
G |
G |
S |
S |
G |
T |
N |
A |
D |
G |
S |
- |
|
|