fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G11260.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt008406 not found in 168aa AT5G11260.1 1st_1st 0.751131221 Ia
Pt005713 not found in 169aa AT5G11260.1 not_1st 0.746606334 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G11260.1     MQEQATSSLAASSLPSSSERSSSSAPHLEIKEGIESDEEIRRVPEFGGEAVGKETSGRES
pt008406_POPTR_ MQEQTTSSIPANSLPSSSERSSSSAPQLEVKEGMESDEEIRRVPEMSGEPAGTSASGRET
pt005713_POPTR_ MQEQAASSIPAYSFPSSSERSSSSAPQLEVKEGMESDEEIRRVPEMSGEPAGTSASGRET
                ****::**:.* *:************:**:***:***********:.**..*..:****:

AT5G11260.1     GSATGQERTQAT-VGESQRKRGRTPAEKENKRLKRLLRNRVSAQQARERKKAYLSELENR
pt008406_POPTR_ GSNAGPDRVQPTGEGQSQRKRGRSPADKENKRLKRLLRNRVSAQQARERKKAYLTELETR
pt005713_POPTR_ GSIAGPGRVQPAGEGQSQRKRGRSPADKENKRLKRLLRNRVSAQQARERKKAYLTELETR
                ** :*  *.*.:  *:*******:**:***************************:***.*

AT5G11260.1     VKDLENKNSELEERLSTLQNENQMLRHILKNTTGNKRGGGGGSNADASL
pt008406_POPTR_ VKDLEKKNSELEERLSTLQNENQMLRQILKNTTASRKGGSSGTNADGS-
pt005713_POPTR_ VKDLEKKNSELEEKLSTLQNENQMLRHILKNTTASRRGGSNSANADGSS
                *****:*******:************:******..::**...:***.*
BoxShade v3.31 C (beta, 970507) Output
AT5G11260.1     M Q E Q A T S S L A A S S L P S S S E R S S S S A P H L E I K E G I E S D E E I R R V P E F G G E A V G K E T S G R E S
pt008406_POPTR_    M Q E Q T T S S I P A N S L P S S S E R S S S S A P Q L E V K E G M E S D E E I R R V P E M S G E P A G T S A S G R E T
pt005713_POPTR_    M Q E Q A A S S I P A Y S F P S S S E R S S S S A P Q L E V K E G M E S D E E I R R V P E M S G E P A G T S A S G R E T
 
AT5G11260.1     G S A T G Q E R T Q A T - V G E S Q R K R G R T P A E K E N K R L K R L L R N R V S A Q Q A R E R K K A Y L S E L E N R
pt008406_POPTR_    G S N A G P D R V Q P T G E G Q S Q R K R G R S P A D K E N K R L K R L L R N R V S A Q Q A R E R K K A Y L T E L E T R
pt005713_POPTR_    G S I A G P G R V Q P A G E G Q S Q R K R G R S P A D K E N K R L K R L L R N R V S A Q Q A R E R K K A Y L T E L E T R
 
AT5G11260.1     V K D L E N K N S E L E E R L S T L Q N E N Q M L R H I L K N T T G N K R G G G G G S N A D A S L
pt008406_POPTR_    V K D L E K K N S E L E E R L S T L Q N E N Q M L R Q I L K N T T A S R K G G S S G T N A D G S -
pt005713_POPTR_    V K D L E K K N S E L E E K L S T L Q N E N Q M L R H I L K N T T A S R R G G S N S A N A D G S S
 
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