fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G11260.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os006916 not found in 199aa AT5G11260.1 1st_1st 0.624434389 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G11260.1     ----------------------------------MQEQATSSLAASSLPSSSERSSSSAP
Os006916_Os02t0 MLHASSKDERRGQSGEAEAEASGGVHANPSSPARMQEQAT-----SSRPSSSERSSSSGG
                                                  ******     ** **********. 

AT5G11260.1     -HLEIKEGIESDEEIRRVPEFGGEAVGKETSGRES-GSATGQERTQATVGE-SQRKRGRT
Os006916_Os02t0 HHMEIKEGMESDEEIGRVPELGLEPGGASTSGRAAGGGGGGAERAQSSTAQASARRRGRS
                 *:*****:****** ****:* *. * .**** : *.. * **:*::..: * *:***:

AT5G11260.1     PAEKENKRLKRLLRNRVSAQQARERKKAYLSELENRVKDLENKNSELEERLSTLQNENQM
Os006916_Os02t0 PADKEHKRLKRLLRNRVSAQQARERKKAYLNDLEVKVKDLEKKNSELEERFSTLQNENQM
                **:**:************************.:** :*****:********:*********

AT5G11260.1     LRHILKNTTGNKRGGGGGSNADASL
Os006916_Os02t0 LRQILKNTTVSRRGPGSTASGEGQ-
                **:****** .:** *. :..:..
BoxShade v3.31 C (beta, 970507) Output
AT5G11260.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M Q E Q A T S S L A A S S L P S S S E R S S S S A P
Os006916_Os02t0    M L H A S S K D E R R G Q S G E A E A E A S G G V H A N P S S P A R M Q E Q A T - - - - - S S R P S S S E R S S S S G G
 
AT5G11260.1     - H L E I K E G I E S D E E I R R V P E F G G E A V G K E T S G R E S - G S A T G Q E R T Q A T V G E - S Q R K R G R T
Os006916_Os02t0    H H M E I K E G M E S D E E I G R V P E L G L E P G G A S T S G R A A G G G G G G A E R A Q S S T A Q A S A R R R G R S
 
AT5G11260.1     P A E K E N K R L K R L L R N R V S A Q Q A R E R K K A Y L S E L E N R V K D L E N K N S E L E E R L S T L Q N E N Q M
Os006916_Os02t0    P A D K E H K R L K R L L R N R V S A Q Q A R E R K K A Y L N D L E V K V K D L E K K N S E L E E R F S T L Q N E N Q M
 
AT5G11260.1     L R H I L K N T T G N K R G G G G G S N A D A S L
Os006916_Os02t0    L R Q I L K N T T V S R R G P G S T A S G E G Q -
 
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