fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G11260.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb003979 not found in 142aa AT5G11260.1 not_1st 0.565610859 II
Sb024674 not found in 380aa AT5G11260.1 not_1st 0.461538461 II
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G11260.1     MQEQATSSLAASSLPSSSERSSSSAPHLEIKEGIESDEEIRRVPEFGGEAVGKETSGRES
Sb024674_Sorbi1 ---TNTST-------------------------VEKKKEKKKEKK-----TSSATATRQQ
Sb003979_Sorbi1 ---------------------------------MESDEEIRRVPEVGLELAGPSTSGRET
                                                 :*..:* ::  :     ..  *: *: 

AT5G11260.1     --------------GSATGQERTQA-TVGESQ--------RKRGRTPAEKENK-------
Sb024674_Sorbi1 WSDQASTDQLPLSFSSALGEVVLLAAVSALATAAAAAPLARVRRRVLQNLAERVVLVLER
Sb003979_Sorbi1 --------------TAAAGTAAGAAGTSSASQAATSA--ARRRGRSPADKEHR-------
                               :* *     * . . :         * * *   :  .:       

AT5G11260.1     ---------------------------RLKRLLRNRVSAQQA------------------
Sb024674_Sorbi1 GHPLLELGIADLQVLGLGLQLRQVRLLPLPRLLRGHAVPQQALQPVLLLVPRGAAALLPG
Sb003979_Sorbi1 ---------------------------RLKRLLRNRVSAQQA------------------
                                            * ****.:. .***                  

AT5G11260.1     ---------------------------------RERKKAYLSE-----LENRVK------
Sb024674_Sorbi1 RRRRLRPRGSRQLPALLAAVLLGALVCARARRGRRRRAAHLRHPPYLLVALRTSFPEVVG
Sb003979_Sorbi1 ---------------------------------RERKKAYLSE-----LEVRVK------
                                                 *.*: *:* .     :  *..      

AT5G11260.1     ------------------------------------DLENKNSE----------------
Sb024674_Sorbi1 GGAGGALAAGGERARGACLRLLLLVLLLLRRHLPPLDLSSHHSKNRSGSPPSSRLPPLLP
Sb003979_Sorbi1 ------------------------------------DLEKRNSE----------------
                                                    **..::*:                

AT5G11260.1     -LEERLSTLQNENQMLRHILKNT-----TGNKRGGGGGSNADASL-------------
Sb024674_Sorbi1 RLLLRLRLLPERKKKRKRKIKSLRTPEGTGDKGGRKKSRCRSDERERTRGRGRREKRV
Sb003979_Sorbi1 -LEERLSTLQNENQMLRQILKNT-----TVNRRGPGGSSAGGDSQ-------------
                 *  **  * :.::  :: :*.      * :: *   .   . .
BoxShade v3.31 C (beta, 970507) Output
AT5G11260.1     M Q E Q A T S S L A A S S L P S S S E R S S S S A P H L E I K E G I E S D E E I R R V P E F G G E A V G K E T S G R E S
Sb024674_Sorbi1    - - - T N T S T - - - - - - - - - - - - - - - - - - - - - - - - - V E K K K E K K K E K K - - - - - T S S A T A T R Q Q
Sb003979_Sorbi1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M E S D E E I R R V P E V G L E L A G P S T S G R E T
 
AT5G11260.1     - - - - - - - - - - - - - - G S A T G Q E R T Q A - T V G E S Q - - - - - - - - R K R G R T P A E K E N K - - - - - - -
Sb024674_Sorbi1    W S D Q A S T D Q L P L S F S S A L G E V V L L A A V S A L A T A A A A A P L A R V R R R V L Q N L A E R V V L V L E R
Sb003979_Sorbi1    - - - - - - - - - - - - - - T A A A G T A A G A A G T S S A S Q A A T S A - - A R R R G R S P A D K E H R - - - - - - -
 
AT5G11260.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - R L K R L L R N R V S A Q Q A - - - - - - - - - - - - - - - - - -
Sb024674_Sorbi1    G H P L L E L G I A D L Q V L G L G L Q L R Q V R L L P L P R L L R G H A V P Q Q A L Q P V L L L V P R G A A A L L P G
Sb003979_Sorbi1    - - - - - - - - - - - - - - - - - - - - - - - - - - - R L K R L L R N R V S A Q Q A - - - - - - - - - - - - - - - - - -
 
AT5G11260.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - R E R K K A Y L S E - - - - - L E N R V K - - - - - -
Sb024674_Sorbi1    R R R R L R P R G S R Q L P A L L A A V L L G A L V C A R A R R G R R R R A A H L R H P P Y L L V A L R T S F P E V V G
Sb003979_Sorbi1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - R E R K K A Y L S E - - - - - L E V R V K - - - - - -
 
AT5G11260.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - D L E N K N S E - - - - - - - - - - - - - - - -
Sb024674_Sorbi1    G G A G G A L A A G G E R A R G A C L R L L L L V L L L L R R H L P P L D L S S H H S K N R S G S P P S S R L P P L L P
Sb003979_Sorbi1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - D L E K R N S E - - - - - - - - - - - - - - - -
 
AT5G11260.1     - L E E R L S T L Q N E N Q M L R H I L K N T - - - - - T G N K R G G G G G S N A D A S L - - - - - - - - - - - - -
Sb024674_Sorbi1    R L L L R L R L L P E R K K K R K R K I K S L R T P E G T G D K G G R K K S R C R S D E R E R T R G R G R R E K R V
Sb003979_Sorbi1    - L E E R L S T L Q N E N Q M L R Q I L K N T - - - - - T V N R R G P G G S S A G G D S Q - - - - - - - - - - - - -
 
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