fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G11260.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb009872 IRRVPELGLELPGAST in 42/168 AT5G11260.1 1st_1st 0.597285067 Ia
Sb003979 not found in 142aa AT5G11260.1 not_1st 0.565610859 II
Sb024674 not found in 380aa AT5G11260.1 not_1st 0.461538461 II
Get sequence file
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G11260.1     MQEQATSSLAASSLPSSSERSSSSAPH--LEIKEGIESDE--------------------
Sb024674_Sorbi1 ----TNTSTVEKKKEKKKEKKTSSATATRQQWSDQASTDQLPLSFSSALGEVVLLAAVSA
Sb009872_Sorbi1 MQEQ-----PASSRPSSSERSSSSAHHMDMEVKEGMESDE--------------------
Sb003979_Sorbi1 -----------------------------------MESDE--------------------
                                                    .:*:                    

AT5G11260.1     -----------EIRR---------------------------------------------
Sb024674_Sorbi1 LATAAAAAPLARVRRRVLQNLAERVVLVLERGHPLLELGIADLQVLGLGLQLRQVRLLPL
Sb009872_Sorbi1 -----------EIRR---------------------------------------------
Sb003979_Sorbi1 -----------EIRR---------------------------------------------
                           .:**                                             

AT5G11260.1     --------VPEFGGE---------------------------------------------
Sb024674_Sorbi1 PRLLRGHAVPQQALQPVLLLVPRGAAALLPGRRRRLRPRGSRQLPALLAAVLLGALVCAR
Sb009872_Sorbi1 --------VPELGLE---------------------------------------------
Sb003979_Sorbi1 --------VPEVGLE---------------------------------------------
                        **: . :                                             

AT5G11260.1     ------------------AVGKETSGRESGS-------ATGQERTQATV-----------
Sb024674_Sorbi1 ARRGRRRRAAHLRHPPYLLVALRTSFPEVVGGGAGGALAAGGERARGACLRLLLLVLLLL
Sb009872_Sorbi1 ------------------LPGASTSGREVGPGAAGADRALAQSSTAQA------------
Sb003979_Sorbi1 ------------------LAGPSTSGRETTAAAGTAAGAAGTSSASQAA-----------
                                    .  **  *          * . . :  :            

AT5G11260.1     -----------GESQRKRGRTPAEKENKRLKR-LLRNRVSAQQARERKKAYLSELENRVK
Sb024674_Sorbi1 RRHLPPLDLSSHHSKNRSGSPPSSRLPPLLPRLLLRLRLLPERKKKRKR--------KIK
Sb009872_Sorbi1 -------------SARRRVRSPADKEHKRLKR-LLRNRVSAQQARERKKAYLTDLEVKVK
Sb003979_Sorbi1 -----------TSAARRRGRSPADKEHRRLKR-LLRNRVSAQQARERKKAYLSELEVRVK
                             : .:   .*:.:    * * *** *: .:: ::**:        ::*

AT5G11260.1     DLE------NKNSELEERLSTLQNENQMLRHILKNTTGNKRG-GGGGSNADASL
Sb024674_Sorbi1 SLRTPEGTGDKGGRKKSRCRSDERERT-------------RGRGRREKRV----
Sb009872_Sorbi1 DLE------KKNSEMEERLSTLQNENQMLRQILKNTTVSRRG-SGSTASGEGQ-
Sb003979_Sorbi1 DLE------KRNSELEERLSTLQNENQMLRQILKNTTVNRRGPGGSSAGGDSQ-
                .*.      .:... :.*  : :.*.              ** .
BoxShade v3.31 C (beta, 970507) Output
AT5G11260.1     M Q E Q A T S S L A A S S L P S S S E R S S S S A P H - - L E I K E G I E S D E - - - - - - - - - - - - - - - - - - - -
Sb024674_Sorbi1    - - - - T N T S T V E K K K E K K K E K K T S S A T A T R Q Q W S D Q A S T D Q L P L S F S S A L G E V V L L A A V S A
Sb009872_Sorbi1    M Q E Q - - - - - P A S S R P S S S E R S S S S A H H M D M E V K E G M E S D E - - - - - - - - - - - - - - - - - - - -
Sb003979_Sorbi1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M E S D E - - - - - - - - - - - - - - - - - - - -
 
AT5G11260.1     - - - - - - - - - - - E I R R - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb024674_Sorbi1    L A T A A A A A P L A R V R R R V L Q N L A E R V V L V L E R G H P L L E L G I A D L Q V L G L G L Q L R Q V R L L P L
Sb009872_Sorbi1    - - - - - - - - - - - E I R R - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb003979_Sorbi1    - - - - - - - - - - - E I R R - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT5G11260.1     - - - - - - - - V P E F G G E - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb024674_Sorbi1    P R L L R G H A V P Q Q A L Q P V L L L V P R G A A A L L P G R R R R L R P R G S R Q L P A L L A A V L L G A L V C A R
Sb009872_Sorbi1    - - - - - - - - V P E L G L E - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb003979_Sorbi1    - - - - - - - - V P E V G L E - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT5G11260.1     - - - - - - - - - - - - - - - - - - A V G K E T S G R E S G S - - - - - - - A T G Q E R T Q A T V - - - - - - - - - - -
Sb024674_Sorbi1    A R R G R R R R A A H L R H P P Y L L V A L R T S F P E V V G G G A G G A L A A G G E R A R G A C L R L L L L V L L L L
Sb009872_Sorbi1    - - - - - - - - - - - - - - - - - - L P G A S T S G R E V G P G A A G A D R A L A Q S S T A Q A - - - - - - - - - - - -
Sb003979_Sorbi1    - - - - - - - - - - - - - - - - - - L A G P S T S G R E T T A A A G T A A G A A G T S S A S Q A A - - - - - - - - - - -
 
AT5G11260.1     - - - - - - - - - - - G E S Q R K R G R T P A E K E N K R L K R - L L R N R V S A Q Q A R E R K K A Y L S E L E N R V K
Sb024674_Sorbi1    R R H L P P L D L S S H H S K N R S G S P P S S R L P P L L P R L L L R L R L L P E R K K K R K R - - - - - - - - K I K
Sb009872_Sorbi1    - - - - - - - - - - - - - S A R R R V R S P A D K E H K R L K R - L L R N R V S A Q Q A R E R K K A Y L T D L E V K V K
Sb003979_Sorbi1    - - - - - - - - - - - T S A A R R R G R S P A D K E H R R L K R - L L R N R V S A Q Q A R E R K K A Y L S E L E V R V K
 
AT5G11260.1     D L E - - - - - - N K N S E L E E R L S T L Q N E N Q M L R H I L K N T T G N K R G - G G G G S N A D A S L
Sb024674_Sorbi1    S L R T P E G T G D K G G R K K S R C R S D E R E R T - - - - - - - - - - - - - R G R G R R E K R V - - - -
Sb009872_Sorbi1    D L E - - - - - - K K N S E M E E R L S T L Q N E N Q M L R Q I L K N T T V S R R G - S G S T A S G E G Q -
Sb003979_Sorbi1    D L E - - - - - - K R N S E L E E R L S T L Q N E N Q M L R Q I L K N T T V N R R G P G G S S A G G D S Q -
 
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